Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3656 |
Symbol | |
ID | 4256154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4353715 |
End bp | 4355187 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124344 |
Product | hypothetical protein |
Protein accession | YP_739693 |
Protein GI | 114049143 |
COG category | [V] Defense mechanisms |
COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACA TTATTTTCTG GGTGCTCACG TTACTGAGTT TGGCGCTATT TGGCGGCGCC ATCTATTTAG TGGCGCGTGC ACTCCTTAAA AAACTCAATC GTGATCAAGG AACAGATATG TCAGCACAGG AACAGCCTGC CACAGCAAAG GGAGCGGCAT TGAAAAACAC CACGCTATTA AAAGCCTTAA CTATTGGCAT ACTGTCGATT GTGGCCTTGC TACCGCTTGG GATCATCATG GACATGACGT CCGATCGCGA AGCCCTGTAC CACAGTGTGG TCGATGAAAT CGGCCGCTCA TGGGGCGAGC AACAAACTCT CTCAGGCCCA GCGCTGGTGA TCCCCTACAG CTATTTTGTG ATGCAGGAAG AAGTCAGTAA CGACGGCAAA ACTCGCCACG AAGTAAAGCG CACCTATCAG GACGAGCTGG TGATCCTGCC GAAAAAACTC AGCCTCGATT TAGATTTAAA GCATGATTTT CGCACCCGCG GCATTTACCA ATCTCTGGTG TATAACGCTG CACTTAATGG GCAGGCTGAA TTTCGCTTAA ACCGTTACGA TATTCCTAAC CTTATTGCCT TCGATAATCA AAATGCCCGC TTAGTCTTTG GGGTGTCATC GAATCAAGCA ATTGATAAAG TAGAAAAAAT TGAGGTGACA GGCGATTCAG TCTTACTCTC TGGCTCACTG ATGTCGGGCA CAGGCTTGAC GACTGGCGGT CTAGAGAAAG GTTTTAACCA AGGGATCCAA GTCGGCGAAG CGAGTGATTT TAGCGTGAAC TTTGCCATGA CACTGCGCGG CTCACAGTCG ATTAGCGCCC TGCCATTAGG CGAACAAACC CTGCTGAATA TCCATGCCGA CTGGCCACAC CCAAGTTTTA AAGGCTTACT CCCGGCAGAG CGCGAAATCA CCGCCAATGG ATTTACTGCC AGCTGGAATA TCAGTCACTT AACCCGTAAC TATCCGCAAG AATTTATTAA GAGTAACCAG TCGACACTCA CAGAAGTCGT CGCCAATGCC ATGCTGTTTG AACCTGTAAC CCATTACGGC AAGATTGAGC GCTCAGTTAA ATACGGCCTG CTGTTTATCG TACTGACTTT TATCATGTTA TTTATTTTCG AGCTGGGTCA AAAGACCAGC CTAAGCACAG TGCAATACAT GCTGGTTGGC AGCGCCATGG CCCTGTTCTA CCTGCTGTTA TTGTCACTCT CGGAGCACCT TGCCTTCCTG CAAGCCTATT TGATCGCCGC CTGTATTCCG GTGTTGTCAG TCTCCGCCTA TGTGGGCAGT GCCACCGCCA GTCTTAAGCG GGGCGCGATT GTCGGCACTA TGCTGGTGAG CTTGTATGCG GTGCTGTACT CAATACTGCA ACTCGAAGAT TACGCCCTGC TGATGGGCAC CGGATTGTTA CTCGTAGTTT TACTGATTTT GATGTTCGTG ACCCGCCATC AACCCAAGAA TACGGTGCAA TAG
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Protein sequence | MFNIIFWVLT LLSLALFGGA IYLVARALLK KLNRDQGTDM SAQEQPATAK GAALKNTTLL KALTIGILSI VALLPLGIIM DMTSDREALY HSVVDEIGRS WGEQQTLSGP ALVIPYSYFV MQEEVSNDGK TRHEVKRTYQ DELVILPKKL SLDLDLKHDF RTRGIYQSLV YNAALNGQAE FRLNRYDIPN LIAFDNQNAR LVFGVSSNQA IDKVEKIEVT GDSVLLSGSL MSGTGLTTGG LEKGFNQGIQ VGEASDFSVN FAMTLRGSQS ISALPLGEQT LLNIHADWPH PSFKGLLPAE REITANGFTA SWNISHLTRN YPQEFIKSNQ STLTEVVANA MLFEPVTHYG KIERSVKYGL LFIVLTFIML FIFELGQKTS LSTVQYMLVG SAMALFYLLL LSLSEHLAFL QAYLIAACIP VLSVSAYVGS ATASLKRGAI VGTMLVSLYA VLYSILQLED YALLMGTGLL LVVLLILMFV TRHQPKNTVQ
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