Gene Shewmr7_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3654 
Symbol 
ID4256152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4351623 
End bp4352789 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID638124342 
Producthypothetical protein 
Protein accessionYP_739691 
Protein GI114049141 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCC CTTTTTCACC CCGCGAGTGG TTACAGCTGA ATATGCAGCA GCAAGGTTTA 
CTGCAACCTC ACTCGTCGGT GAGCGAGCTG ATTAGCCGCC TTGGTTATGT GCAAATCGAC
TCCATCAATG TGGTCGAGCG GGCACATCAC CATGTGCTGC ACAGTCGGAT GCCGCAGTAT
CAAACCATGA TGCTGGATAT GGCGTTAGCG CAGGGGGAGA TTTTTGAATA TTGGTCCCAT
GCGGCGGCCT ATTTGCCGAT TGCCGACTAC CGTTTTAGTT TGCAGCGTAA ACAGCTGCTA
CAAAATGGCG GAAAACATTG GTTTGAGCCA GACGATAAGG TGATGCAGGA AGTGCGCTCC
CGCATTCGCA CCGAAGGGCC ACTCAAGGCC AGTGACTTTG AACATACTGA AGGTAAAAAT
GGCGCTTGGT GGGACTGGAA ACCCGCCAAA AAGGCATTAG AGCAGTTGTT TATGCGCGGC
GAGCTAATGG TGGTGCGGCG GGAGAAATTT CAAAAATGTT ATGATCTTAC CGAACGCGTG
CTGCCTGAGC ATATCAATAC CCAAGCGCCT AGCGAGGCCG AATTTGCCCA CCATTTGATT
GAGCGTTACC TCGATGCCCA TGCCTTTGGC TCGGCGGCGC AAATCGCGTA TCTGCGCAAA
GGCATAAAAG CCAATGTGAA TGAGCAATTA GCCGCAATGC AGTCCCAAGG TGAATTAGCG
AGCTTTAAGG CCGAAGGGCA ATGGTATTTT TATCGCCCCG AGCTGCGAAT AACCGCTGCG
ATGCCTAACC GAGTCTGGTT ACTCAATCCC TTCGATAATC TATTAATTCA GCGGCAACGA
TTAAAGCAAT GGTTTGATTT TGATTATCAA ATTGAAGTCT ATGTGCCCGC CGAAAAACGC
CAATATGGCT ATTACTCCCT CGCGATTCTG TGGCGCGACC GCTTCGTTGG TCGAGTAGAT
GTGAAAGCCG ATCGGCAAAG CGGTTTACTG CTATTACAGC AGCTGACCCT AGAAGCTGGA
TTCGATGGCA TGGATGATGA CTTTTGTGCG GCATTTGAGG CGGCAGTCAC TGAGTATGCG
CGCTTTAATG GCTGTAGCCG CTGGAAACTG GTGAAGGCTA ACCATAAGGC ATTTAAACAA
AAATACGCAC GGCAGCAGAA GATCTAA
 
Protein sequence
MSSPFSPREW LQLNMQQQGL LQPHSSVSEL ISRLGYVQID SINVVERAHH HVLHSRMPQY 
QTMMLDMALA QGEIFEYWSH AAAYLPIADY RFSLQRKQLL QNGGKHWFEP DDKVMQEVRS
RIRTEGPLKA SDFEHTEGKN GAWWDWKPAK KALEQLFMRG ELMVVRREKF QKCYDLTERV
LPEHINTQAP SEAEFAHHLI ERYLDAHAFG SAAQIAYLRK GIKANVNEQL AAMQSQGELA
SFKAEGQWYF YRPELRITAA MPNRVWLLNP FDNLLIQRQR LKQWFDFDYQ IEVYVPAEKR
QYGYYSLAIL WRDRFVGRVD VKADRQSGLL LLQQLTLEAG FDGMDDDFCA AFEAAVTEYA
RFNGCSRWKL VKANHKAFKQ KYARQQKI