Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3631 |
Symbol | |
ID | 4256129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4310483 |
End bp | 4311382 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124315 |
Product | tyrosine recombinase XerC |
Protein accession | YP_739668 |
Protein GI | 114049118 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.465228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC AGTGTCGGAC CTATTTACAG CAGTTTGAAA CCTATATGCA GTCTGAGCGC CAGTTATCGG CGCATACGGT TCGCAATTAT ATGTATGAAT TGCAGCGGGG AAGCGAGTTA CTGCCCGAGG GCGTCGATCT GCTCAATGTG GGCCGTGAGC ATTGGCAACA GGTGCTTGCT AAGCTGCACC GCAAGGGCTT GAGCCCGCGC TCGCTATCAT TGTGGTTGTC GGCCATCAAA CAATGGGGAG AGTTTTTATT ACGCTCAGGC GTGATTGAAC TTAATCCTGC CAAGGGGCTG AGTGCGCCCA AACAAGCCAA ACCGTTACCG AAGAATATCG ACGTCGATTC TATCTCGCAT CTGCTCGCGA TTGAGGGCAA TGATCCGCTG ACCCTGCGTG ATAAAGCCAT TATGGAGCTG TTTTACTCCA GTGGATTGCG CTTGGCTGAA CTGGCGGCGC TGGACTTATC CAGTGTGCAA TACGACCAGC ATGAAGTGCG CGTGTTAGGC AAAGGCAACA AAGAGCGCAT CGTCCCCGTT GGGCGTTACG CCATAGAGGC CATCAGCGCT TGGCTCAAGT GCCGCAAACA AATTTCCTGT GAAGATAATG CATTGTTTGT CACGGAGAAG GGCAAGCGTT TGTCCCATCG CAGTATTCAG GCGCGCATGA GTAAATGGGG TCAGGAGCAG GCACTTTCTA TGCGGGTGCA TCCCCATAAG TTACGCCATT CCTTTGCGAC GCACATGCTG GAATCTAGTG CCGATTTACG GGCGGTGCAG GAATTATTAG GCCACGAAAA CCTGTCGACC ACGCAAATTT ATACCAGTTT AGATTTCCAA CACTTAGCTA AGGTGTATGA TAACGCCCAT CCTAGAGCGA AAAAACAACA GGATAAATAA
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Protein sequence | MTPQCRTYLQ QFETYMQSER QLSAHTVRNY MYELQRGSEL LPEGVDLLNV GREHWQQVLA KLHRKGLSPR SLSLWLSAIK QWGEFLLRSG VIELNPAKGL SAPKQAKPLP KNIDVDSISH LLAIEGNDPL TLRDKAIMEL FYSSGLRLAE LAALDLSSVQ YDQHEVRVLG KGNKERIVPV GRYAIEAISA WLKCRKQISC EDNALFVTEK GKRLSHRSIQ ARMSKWGQEQ ALSMRVHPHK LRHSFATHML ESSADLRAVQ ELLGHENLST TQIYTSLDFQ HLAKVYDNAH PRAKKQQDK
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