| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3629 |
|---|
| Symbol | |
|---|
| ID | 4255048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4309035 |
|---|
| End bp | 4309613 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124313 |
|---|
| Product | HupE/UreJ protein |
|---|
| Protein accession | YP_739666 |
|---|
| Protein GI | 114049116 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2370] Hydrogenase/urease accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0223294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGTT TAAGTCTGTT GCTCCTCTTG AGTCTATCGT TTATTGCCCC TGCGTCGGCG
CACGAAATCC ACTCCGGTGG TGGTTTTATG GCGGGCTTTA ACCATCCCGT TTTAGGCTTT
GACCATCTCC TTGCCATGTT GAGTGTGGGT ATGCTCAGTA CTCAATTGGG CGGCCGCGTC
ATTTGGACTG TGCCCTTAGC CTTTGTGTGT TTTATGTTGG TGGGTGGCAT TTTAGGCCTG
TATGCGATTC CGGTGCCCTT TGTCGAAATT GGCATTGCGC TATCTGTCTT ATTGCTTGGG
CTAGCGATAG CTTTTGACCG CCAACTTCCG CTGTTGTTTG CCATGGCCTT TGTGGGCGTG
TTTGCGATTT TCCACGGCCA TGCCCATGGG ATGGAAATGC CTGAACTCGC CAGTCCCATA
CTCTATGCCT TCGGTTTCTT GTTTGGCACT GCGGTCATTC ATCTTGGTGG GGTCATGTTA
GGATTAGGCA TGCAGCGCGT GACGGGCCAG CGCAGCTTAA TGCGGGTATC GGGTGTAGCG
ATTGCGGCTA TGGGGGGGTA TTTACTCGCA GGCTTTTAA
|
|---|
| Protein sequence | MVRLSLLLLL SLSFIAPASA HEIHSGGGFM AGFNHPVLGF DHLLAMLSVG MLSTQLGGRV
IWTVPLAFVC FMLVGGILGL YAIPVPFVEI GIALSVLLLG LAIAFDRQLP LLFAMAFVGV
FAIFHGHAHG MEMPELASPI LYAFGFLFGT AVIHLGGVML GLGMQRVTGQ RSLMRVSGVA
IAAMGGYLLA GF
|
|---|
| |