Gene Shewmr7_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3622 
Symbol 
ID4255041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4303038 
End bp4303709 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID638124306 
Productfumarate reductase respiratory complex, transmembrane subunit 
Protein accessionYP_739659 
Protein GI114049109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.468172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AACTAAGTAT AAAAAAATGG AGTGCGTGGC TGGATTTAAG CCAGAGTTTG 
TCGGGTGTCA TTCTGGCGGT GTTTTTGTGG ACCCACTTAG TGCTGGTGTC GTCCATTTTA
TTGGGTGGCG ATGCCATGAA CTGGGTAGCC CGTACTATGG AGCTGAGCTT TCTCTCCAGT
GACGGCCATG GCTATCCCTG GGTGGTGACT TGTATTGCCG TCGGTATTGC CGCCCTAGCA
TTGGTACATG TGATTGTTGC ACTGCAAAAG TTACCCATGA GTTTGCGTCA GCAAAGGGCA
CTGCAACAGC AGATGCAAGT GATTAATCAC AGTGATACTC GCCTCTGGCG TTGGCAGGCC
ATTACGGGCG TGGTGATCCT GTTATTGCTG CCGGTGCATT TGTGGCTTAT CGGCTCGGCG
CCAGAAACCA TAGGCCCGCA GGGCAGTGCC GAGCGGATTT GGAACCAAGG CGTGTGGATG
GTGTATCTGC CGCTATTGCT GACGGTGGAG TTACATGCAG CCATCGGGAT TTACCGCGTA
GCACTGAAGT GGGGCGCGGC GCGGGATCTC AATAGTCGCA GCCGTTTACG TAAGATTAAA
ACCATTGTGA GTATCGCGTT TGTCACTGTA GGGATTGCCT CCCTGTTGGC ATTTTTACCC
CACGCGAGTT AG
 
Protein sequence
MAIKLSIKKW SAWLDLSQSL SGVILAVFLW THLVLVSSIL LGGDAMNWVA RTMELSFLSS 
DGHGYPWVVT CIAVGIAALA LVHVIVALQK LPMSLRQQRA LQQQMQVINH SDTRLWRWQA
ITGVVILLLL PVHLWLIGSA PETIGPQGSA ERIWNQGVWM VYLPLLLTVE LHAAIGIYRV
ALKWGAARDL NSRSRLRKIK TIVSIAFVTV GIASLLAFLP HAS