| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3621 |
|---|
| Symbol | |
|---|
| ID | 4255040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4300970 |
|---|
| End bp | 4302976 |
|---|
| Gene Length | 2007 bp |
|---|
| Protein Length | 668 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638124305 |
|---|
| Product | fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_739658 |
|---|
| Protein GI | 114049108 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTGA TTTATACCGA TTCATTAGTG GTTGGTGCCG GATTGGCTGG CCTGAGGGTG
GCCATTGCCT CTAAAGAGCG CGGGTTAGAT ACCTTAGTGC TATCACTTAT CCCCGCCAAA
CGTTCTCACT CCGCTGCAGC GCAGGGGGGA ATGCAGGCCA GTCTTGGCAA TGCCGTCAAA
GGCATGGGCG ATGATGAAGA CGTGCATTTT CAAGATACGG TGAAAGGATC GGACTGGGGC
TGCGATCAAG AAGTCGCCAG AATGTTTGCC CATTGTGCAC CTAAGGCGGT GCGTGAATTA
GCCAACTGGG GCGTGCCTTG GACACGTGTG ACTGCAGGCC CAAGGGAAGT GATTGTTAAC
GCCCAAAAAG TCACATTGCA GGAAGCCGAA GAAGCCCACG GTCTGATCAA TGCTCGCGAC
TTTGGCGGCA CTAAAAAGTG GCGCACCTGC TATACCGCCG ACGGTACAGG TCACTCCTTA
CTCTATGCCA TGGATAACAA AGCGATTTCG TTGGATATTC CTGTTCACGA GCGCGTTGAA
GCACTGGCGA TAATCCACGA TGGTCAACGC TGTCACGGAG TGATTGCCCG CTGTTTAATC
ACGGGCGAGC TGCGTGCCTA TGTGGCTAAA TCGACCACGA TCGCCACCGG TGGCTATGGC
CGTATTTATG AAGTCTCAAC CAATGCGATT ATCTGCGAGG GTATAGGTCA GGCGCTGGCG
CTCGAAACGG GGGTCGCGAC CCTTGGCAAC ATGGAAGCGG TACAGTTCCA CCCAACGGCA
ATTGTGCCCG TGGGGATTTT AACCACAGAA GGTTGCCGCG GTGATGGTGG CTTGCTGCGG
GATAAGGACG GTTACCGTTT TATGCCGGAC TATGAGCCAG AGAAGAAAGA ACTGGCGTCG
CGGGACGTGG TGTCTCGCCG CATGACCGAA CATATGCGTA AAGGTAAGGG CGTCGATAGT
CCCTATGGCC CACATTTATG GCTCGATATC ACCCTGCTTG GGCGCAAGCA TATCGAAACC
AACCTGCGTG AAGTGCAGGA GATTTGCGAA AACTTCCTCG GTATCGATCC CGCGAAGGAT
TGGATCCCCG TTCGTCCAAC TCAGCACTAT TCCATGGGCG GGATCCGCAC TAAGGCAACG
GGCGAGAGTC CGCAGCTTAA GGGCTTATTC AGCGTGGGTG AGGCGGCCTG TTGGGATATG
CATGGCTTTA ACCGATTGGG CGGCAACTCG CTCGCCGAAA CTGTGGTTGG CGGCATGATT
ATCGGCAAAT ATGTGGCTGA TTTTTGTGAG AATAACAGTC TTGAAATCGA CACTCAGCTT
GCCGAAAAGT TTATGCGGCA GGTACAGACT GAAATTGACA CCTTAGTCGA TGGTGAAGGT
CATGAAAGTC CCTTTGAACT TAAGCGCGAA ATGCAGCGGA TTATGATGGA TTACGTGGGG
ATTTTCCGTA ATGGCCCAGA ACTCGATAAG GCGGTGACAG AGCTAAAGGT GCTGCTTGAA
CGCTCACGTA AGCTCGGAGT TAAGTGTAAG AAACGCCATG CCAATCCTGA GCTAGTAGAA
GCACTAAGGG TAAAGCGGAT GCTTAAGGTG GCGTTAACGG TGGCCTGTGG CGCAGCAGCG
CGTACCGAGA GCCGTGGTGC CCACGCCCGT GAGGATTATC CGCAGCGTAA TGACAGAGAC
TGGCTCAACC GTACTCTCGC AAGTTGGCCC GATGCCGAGG CGTTGGCCCC CGTTTTAAGC
TACGAGCCGC TGGATGTGAT GAAGATGGAG TTGCCGCCGG GATACCGGGG TTACGGTATC
GATAATGCCA TTGTTCACCC TGATACCGCT AAACGCGAGC AGCAAATTGC CGAGATTTTG
GCCGGGCTGG GTGATGATGC TGACCGTTAC CAGCGCCAAA CGGCGCTGAT GCCCTTCGAG
CTGCCGCCTA GCCTGCAAGC AAAAAATGAA CGTTTAAGTG ATACCTTACA AAGACCATCT
GCCAATGCGC TAGGAGAAAA ATCATAA
|
|---|
| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK
GMGDDEDVHF QDTVKGSDWG CDQEVARMFA HCAPKAVREL ANWGVPWTRV TAGPREVIVN
AQKVTLQEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS LDIPVHERVE
ALAIIHDGQR CHGVIARCLI TGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTKAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCE NNSLEIDTQL AEKFMRQVQT EIDTLVDGEG HESPFELKRE MQRIMMDYVG
IFRNGPELDK AVTELKVLLE RSRKLGVKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDYPQRNDRD WLNRTLASWP DAEALAPVLS YEPLDVMKME LPPGYRGYGI
DNAIVHPDTA KREQQIAEIL AGLGDDADRY QRQTALMPFE LPPSLQAKNE RLSDTLQRPS
ANALGEKS
|
|---|
| |