| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3606 |
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| Symbol | |
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| ID | 4255025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4288255 |
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| End bp | 4289520 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124290 |
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| Product | type II secretion system protein |
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| Protein accession | YP_739643 |
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| Protein GI | 114049093 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGG CAACAACAGT AAAAAAGCCT CGCGCCAAAA AGAACGAGCA ACAAACTCCC
CCCAAAATAT ACACCTTTGA GTGGAAGGGC TTAAACCGGG ATGGTAAAAA AACCAGTGGC
GAATTAAAAG GCGCCAGTGT CGCCGAGGTC AAAAGCCAAC TTAAGCTCCA AGGGGTTAAC
CCTAAAGTTG TCCGCAAAAA GGCATCACCT CTTTTCGCTC GCAATCCCGA TATCAAACCT
ATGGATATCG CCATGGTGAC CCGCCAAATA GCAACTATGC TGGCAGCTGG TGTTCCCTTA
GTCACTACCA TAGAAATGCT CGGCCGTGGC CATGAAAAAC AAAAAATGCG CGAGCTGCTA
GGTACTATAT TGTCGGAAGT ACAATCGGGT ATTCCACTAT CAGACTCGCT GCGCCCCCAT
AGACGCTATT TCGATGATCT CTACGTCGAC TTAGTGGCAG CGGGTGAACA CTCAGGTTCA
CTCGATGCCG TGTTTGACCG AATCGCAACC TATAGAGAAA AAGCCGAAGC CTTAAAATCT
AAAATTAAAA AGGCGATGTT TTATCCAGCG GCCGTTGTAG TGGTGGCGAT ATTAGTGACA
ACACTGCTAT TGCTCTTTGT TGTCCCCCAA TTTGAAGATA TTTTTAAAAG CTTTGGCGCT
GAACTTCCCG CGTTTACGCA ATTAATTATT GGTATTTCAC GCTTTTTACA GAGCTCTTGG
TATATTTTCC TTGCTGCCAT CATTATTTGT GTTTGGTTAT TTGTACGCGC CCACCGCAAT
TCGCAAATGT TTAGGGATCG AATAGATGAA CTCGTGCTGA AAATCCCAGT GATTGGCGAC
ATTCTCCATA AGGCGGCGAT GGCACGATTT TCCCGTACTT TAGCCACCAC ATTTGCGGCA
GGGGTGCCTT TAATCGATGG AATGGAATCA GCTGCGGGAG CCTCTGGCAA CGCGGTTTAT
CGAGCCGCGT TATTAAAAGT ACGCCAAGAA GTGATGGCAG GGATGCAGAT GAACGTTGCC
ATGCGCACCA CTGGGCTCTT CCCCGATATG CTGATCCAAA TGGTGATGAT CGGTGAAGAA
TCCGGCTCAC TCGATAATAT GCTCAATAAA GTAGCCAATA TTTATGAGAT GCAGGTTGAT
GATGCCGTTG ATGGCTTATC AAGCCTTATC GAACCCATTA TGATGGTAGT CATTGGTACC
TTGGTTGGTG GCTTAATTGT CGGTATGTAT CTGCCAATTT TCCAAATGGG CAATGTTGTG
GGTTAG
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| Protein sequence | MATATTVKKP RAKKNEQQTP PKIYTFEWKG LNRDGKKTSG ELKGASVAEV KSQLKLQGVN
PKVVRKKASP LFARNPDIKP MDIAMVTRQI ATMLAAGVPL VTTIEMLGRG HEKQKMRELL
GTILSEVQSG IPLSDSLRPH RRYFDDLYVD LVAAGEHSGS LDAVFDRIAT YREKAEALKS
KIKKAMFYPA AVVVVAILVT TLLLLFVVPQ FEDIFKSFGA ELPAFTQLII GISRFLQSSW
YIFLAAIIIC VWLFVRAHRN SQMFRDRIDE LVLKIPVIGD ILHKAAMARF SRTLATTFAA
GVPLIDGMES AAGASGNAVY RAALLKVRQE VMAGMQMNVA MRTTGLFPDM LIQMVMIGEE
SGSLDNMLNK VANIYEMQVD DAVDGLSSLI EPIMMVVIGT LVGGLIVGMY LPIFQMGNVV
G
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