Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3602 |
Symbol | |
ID | 4255021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4282954 |
End bp | 4283493 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124286 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_739639 |
Protein GI | 114049089 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.288679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTG ATGCTGGATG GTTTTCCTCG GCTCGACGCT GTGAGTCACC GCATTTTAAC CGTCGTCCCT TTGGGGAAAT TAGCCTGTTG GTGATCCACA ATATCAGCCT GCCAGCGGGA TGCTTTGGAC TTCCCTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC TGAGGCCGAT GAAAGTTTCG CCGATTTAGC GGGGCTGCAA GTATCAGCAC ATTTTTTAAT TCGCCGCGAT GGTGAATGTG TGCAGTATGT CAGTTGTGAA GATAGAGCCT GGCACGCAGG CGTATCTCGT TATGGAGAAA GGGAAAATTG TAATGATTTC TCTATCGGTA TCGAGCTTGA AGGCACAGAT AATGAGCCCT ATACTGCGGC CCAATATCAG CAGCTTACAG AGTTGACTCT AGCCTTATTG GCGCAGTATC CGGCATTAAC AGCGCAGCGG ATTGTAGGGC ATTGTGACAT TGCACCGATG CGCAAGACGG ATCCAGGACC AAGCTTCGAC TGGGAAAGGT ATTTAACCGC GTTAGGCTAG
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Protein sequence | MRFDAGWFSS ARRCESPHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTEAD ESFADLAGLQ VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD NEPYTAAQYQ QLTELTLALL AQYPALTAQR IVGHCDIAPM RKTDPGPSFD WERYLTALG
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