Gene Shewmr7_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3602 
Symbol 
ID4255021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4282954 
End bp4283493 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID638124286 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_739639 
Protein GI114049089 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.288679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTG ATGCTGGATG GTTTTCCTCG GCTCGACGCT GTGAGTCACC GCATTTTAAC 
CGTCGTCCCT TTGGGGAAAT TAGCCTGTTG GTGATCCACA ATATCAGCCT GCCAGCGGGA
TGCTTTGGAC TTCCCTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC TGAGGCCGAT
GAAAGTTTCG CCGATTTAGC GGGGCTGCAA GTATCAGCAC ATTTTTTAAT TCGCCGCGAT
GGTGAATGTG TGCAGTATGT CAGTTGTGAA GATAGAGCCT GGCACGCAGG CGTATCTCGT
TATGGAGAAA GGGAAAATTG TAATGATTTC TCTATCGGTA TCGAGCTTGA AGGCACAGAT
AATGAGCCCT ATACTGCGGC CCAATATCAG CAGCTTACAG AGTTGACTCT AGCCTTATTG
GCGCAGTATC CGGCATTAAC AGCGCAGCGG ATTGTAGGGC ATTGTGACAT TGCACCGATG
CGCAAGACGG ATCCAGGACC AAGCTTCGAC TGGGAAAGGT ATTTAACCGC GTTAGGCTAG
 
Protein sequence
MRFDAGWFSS ARRCESPHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTEAD 
ESFADLAGLQ VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD
NEPYTAAQYQ QLTELTLALL AQYPALTAQR IVGHCDIAPM RKTDPGPSFD WERYLTALG