| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3601 |
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| Symbol | |
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| ID | 4255020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4282025 |
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| End bp | 4282876 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638124285 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_739638 |
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| Protein GI | 114049088 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.088498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTAT TTTCATTACT GGTCGCCATT CTTGTGGAAC GATTGAAGTT CCTTCCCGCT
TCGTGGCAAT GCGATCGCGT GCTGCAATCC TATCAATCCA CTTTCTTTGG TGACAAAGCC
TCGTTAACTA ATACCAGTAT GTTGCTCGCT TTAGTGTTGC CCGCCTTGGT CGTGCATGTT
TTGGGTTGGG TAGCCTCTGG CATGTTCTGG GGGCTGTTAA CTCTTGCCCT GTGGGTGGTG
GTGGCAATTA TTTGCTTTAA TCATCAAAAA CAGCGCGATA GCTTTAAAAA GTATATGCAG
GCGGCGTGTC GCTCAGACGT GCAAGCCTGT TACCACTATG CCGCCGAATT AGATTGCAGT
GAGTGTTTAG ATGCGGTGTC TGAAAAAGAC TTAGGCGCCA AGGTCGGGCA GAGTGTTGCC
TGGATTAACT ATCGTTATTA CGGCGCAGTG GCATTATGTT TTATCTTCCT AGGCCCAGTT
GGCGCTGTCT TATATTGCAC CGCGCGTTTT TATGCCGAAG AGAATGTGCG TAAATCCCTT
AACCTACCGC TTATCGAAGA TATTATGTTT GTCCTAGATT GGATCCCGAG CCGGGTGTTT
TCCTTTGGCT ATGCGCTCAG CGGTCAGTTT AGTGAAGGGC TCTCGGCTTG GCGTGACCAT
GCCTTAAACA TCAATGCGAG TGCCAGAAGG GTCGTGACAG AAACGGCGTT AGCCTCCCAG
CCGCTGCCAG AGGAGTCTAG TGCACCAGTT TGTGTACAAT CGACCTTGGC ATTATTAGTT
TTAAGTAAAC GCAACTTTAC GCTGATGGTG GCTGTGCTGT CGCTGTTGAC CATTTTTGGC
CTAGTGACCT AA
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| Protein sequence | MALFSLLVAI LVERLKFLPA SWQCDRVLQS YQSTFFGDKA SLTNTSMLLA LVLPALVVHV
LGWVASGMFW GLLTLALWVV VAIICFNHQK QRDSFKKYMQ AACRSDVQAC YHYAAELDCS
ECLDAVSEKD LGAKVGQSVA WINYRYYGAV ALCFIFLGPV GAVLYCTARF YAEENVRKSL
NLPLIEDIMF VLDWIPSRVF SFGYALSGQF SEGLSAWRDH ALNINASARR VVTETALASQ
PLPEESSAPV CVQSTLALLV LSKRNFTLMV AVLSLLTIFG LVT
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