| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3598 |
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| Symbol | |
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| ID | 4255017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4276126 |
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| End bp | 4278141 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638124282 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_739635 |
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| Protein GI | 114049085 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0152681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGATGAAGT ACAGATTATC
GAAATCTGTG CTTCTGTGGG CGATACCTTA GCAGCGGAAG AGTCGATTCT GACCGTTGAA
AGCGACAAGG CGACCATGGA CATTCCTGCG CCTTTCGCGG GTGTGTTAGC CGAATTGAAA
GTGGCCGTCG GTGACAAAGT CAGCGAAGGT ACCTTAATTG CGATGATGCA AGCAGCGGGC
ACGGCTAATG TTCAAGCTGC GCCTGTTGCT CAAGCTGCCG CTCCTGCGCC AGCCCCTGCA
GCACCTGCAC CAGTACAAGC GGCTCCAGCC CCTGTGGCTG CCGCGCCAGC GACGGGCGCA
ACCCAAGTGG TTGAAGTCAC TGTGCCGGAT ATCGGTGGTG ACACCGACGT GTCAGTTATC
GAAGTCTTAG TTGCCGCTGG CGATAAGATT GAGGTTGACG CTGGCCTTAT CACGCTTGAA
ACCGACAAAG CGACCATGGA CGTACCATCG CCATTCGCGG GTGTGGTAAA AGAAGTGAAA
GTGGCAGTGG GTGACAAGGT TTCTCAAGGC TCATTAGTGA TCATGCTCGA AGTGGGCGGC
GCGGCACCTG CTGCAGCGCC ACAAGCGAGC GCGCCAGCAG CCTCTGCACC TGTCGCTCAA
GCGGCTCCTG CTGCGCCAGT TGCTCCAGTA GCCGCTGCAT CACCAGTGGT TGCGGTTAAA
GAAATCCAAG TGCCTGATAT TGGCGATGCG AGCAATGTCG ATGTGATCGA AGTGCTCGTG
TCTGTGGGTG ATGACATCAC AGTTGATCAA GGTTTAATTA CCCTTGAAAC CGATAAAGCG
ACCATGGAAG TACCTGCGCC ATTCGCCGGT AAACTGTTGT CGTTAACCGT TAAAGTGGGT
GACAAGGTTT CTCAAGGCAG CGTGATTGCG ACGATTGAAA CTGTGACTGC TGGTGCAGCT
CCTGCACCTC AAGCAGCAGC GCCAGCACCA GTTGCCCAAG AAGCGGCACC AGCGCCTGTT
GCAGCCGCTC CTAGCCGTCC ACCTGTTCCA CATCACCCAA GTGCGGGTGC GCCAGTGGCA
ACCGGTGTGG TGCATGCGTC TCCAGCGGTT CGTCGTTTGG CCCGTGAATT TGGTGTGGAC
CTCACTCAAG TGACGGGTTC TGGCCGTAAA GGTCGCATCA TGAAGGAAGA CGTACAGGCG
TATGTGAAGT ACGAACTGTC TCGTCCTAAG GCGACAGCAG CAACTTCAGT TGCAGCGGGT
AACGGTGGTG GTCTGCAAGT GATTGCTGCA CCGAAAGTGG ATTTCAGCAA GTTTGGTGAA
GTGGAAGAGA TTCCATTAAG CCGTATCCAG AAGATCTCTG GTCCAAACCT GCACCGTAAC
TGGGTAACCA TTCCTCACGT GACTCAGTTC GATGAAGCTG ATATCACCGA AATGGAAGAG
TTCCGTAAGC AGCAGAACGA CGCGGCGGCG AAGAAAAAAG CCGATTATAA GATCACTCCG
CTGGTCTTTA TGATGAAAGC CGTGGCGAAA ACGCTGCAAC AGTTCCCAGT GTTCAACTCA
AGCTTAAGCA GCGACGGTGA ATCACTGATC CAGAAGAAGT ACTACCACAT CGGTGTGGCG
GTTGATACGC CAAACGGTCT AGTGGTACCT GTGGTACGTG ACGTGGATAA GAAAGGGATC
ATCGAGTTAT CTCGTGAGCT GGCCGATATT TCTGTCCGTG CCCGCGATGG TAAGCTCAAA
TCTGCCGATA TGCAGGGCAG CTGCTTCACT ATTTCAAGCC TAGGTGGCAT TGGTGGTACT
GCGTTTACCC CAATCGTTAA CTACCCAGAC GTGGCGATTT TAGGTGTGTC TAAATCTGAA
ATTAAGCCTA AATGGAATGG TAAAGAGTTC GAGCCTAAAT TGATGTTGCC ACTGTCGCTA
TCATACGATC ACCGCGTGAT CGATGGTGCT ATGGCTGCAC GCTTTAGCGT GACCCTGTCA
GGAATTCTGT CCGATATTCG TACTTTGATT CTGTAA
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| Protein sequence | MAELKEVFVP DIGGDEVQII EICASVGDTL AAEESILTVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIAMMQAAG TANVQAAPVA QAAAPAPAPA APAPVQAAPA PVAAAPATGA
TQVVEVTVPD IGGDTDVSVI EVLVAAGDKI EVDAGLITLE TDKATMDVPS PFAGVVKEVK
VAVGDKVSQG SLVIMLEVGG AAPAAAPQAS APAASAPVAQ AAPAAPVAPV AAASPVVAVK
EIQVPDIGDA SNVDVIEVLV SVGDDITVDQ GLITLETDKA TMEVPAPFAG KLLSLTVKVG
DKVSQGSVIA TIETVTAGAA PAPQAAAPAP VAQEAAPAPV AAAPSRPPVP HHPSAGAPVA
TGVVHASPAV RRLAREFGVD LTQVTGSGRK GRIMKEDVQA YVKYELSRPK ATAATSVAAG
NGGGLQVIAA PKVDFSKFGE VEEIPLSRIQ KISGPNLHRN WVTIPHVTQF DEADITEMEE
FRKQQNDAAA KKKADYKITP LVFMMKAVAK TLQQFPVFNS SLSSDGESLI QKKYYHIGVA
VDTPNGLVVP VVRDVDKKGI IELSRELADI SVRARDGKLK SADMQGSCFT ISSLGGIGGT
AFTPIVNYPD VAILGVSKSE IKPKWNGKEF EPKLMLPLSL SYDHRVIDGA MAARFSVTLS
GILSDIRTLI L
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