| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3595 |
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| Symbol | |
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| ID | 4257980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4267499 |
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| End bp | 4269715 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638124279 |
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| Product | patatin |
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| Protein accession | YP_739632 |
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| Protein GI | 114049082 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0117026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.37392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTC GAATATTCGC TTCTGTCTTT TTATGTTTAC TGTTAACGCC CTTGTATGCG
GCAGAACGGC CTAAGGTCGG GCTGGTGCTC AGTGGTGGTG GCGCTAAAGG TGCCGCCCAT
GTTGGCGTAC TTAAAATCCT AGAAGAACAT CAGATCCCCG TGGACTATAT CGCAGGCACC
AGTATCGGCG CTTATGTGGC CGGCATGTAT TCATTGGGTT ACAGCGCTAG CGAAGTCGAA
GCCATTATGA TGGGCGTTGA TTGGGATAGC GGTTATTCGG ATACCATTCC GCGTAATGTC
TTGAGTTATC GAGATAAACA GTTACGTGAT CGTTACAATA TCCCCCTCAA CATTGGTTAC
AACGAGGGTG AAGTCCGAGC TCCGAGTGGT TTGTTGCGTG GACAAACTAT GTCACAGTTA
TTACGTCAAT CGACCGATCT TGTGCAGCAG TTTGGCGATT TTGATGAGCT AGCCATCCCT
TATCGTGCCG TCGCAACCGA CCTAGAAACC AGTTTACCCG TAGTGCTTAA CCATGGCAGT
TTAGTCAAAG CCATGCAGGC ATCTGCGACT GTGCCGGGTG CGCTGCAGCC GACACAAATC
GATGGCAAGT TATTAGTCGA CGGCGGAATA GCCAACAATA TGCCCGTTGA CGTGGTTAAG
GCCATGGGCG CGGACATTAT CATTGCCGTG GATATCGGCT CGCCACTGGT GACCAAAGAT
AAACTCGATA GCACGATTGC GGTGCTCGAT CAGTTATCTA ACTTCTTGAC TAACGCCAGC
ACCGAAAAGC AAAAGCAGCT GCTAACAGAT AGAGACGTGC TGATCCGTCC CGCGATCGAT
GCCTTAAGCA CGACTGACTT TACCATCATG CCTTTGGCCC TCACGCTAGG GAAAGAAGCC
GCCAATGGTC AACTGGATAA ATTACAGAGC ATGAGCGTCA GCGCCGAAGA ATATGCAGCC
TATGTTGAAG CTAAGAAGGT TAAGGGCAAA AAATTAATGG CGGATGTGGC GCATCCAATC
CAAGAAATTG TGTTCGATAA TCAGTCGAAG GTGAGTCTTA ATTTATTGAA GGAAACCTTA
GATCTCAAAG CCGGCCAAGC CGTGACTAAG GATGAATTGA ACGAAGCCTT AAAACGCATC
TATTCCCTTA ATAAATTTGA GCGCGTGGAT GCCGAATTTA TTGAATCCGA AGAAGGCCGC
GTGCTGACAG TGACCACTCG GGCTAAATCA TGGGGGCCAA ATTACTTCCA ACTCGGTTTT
AACTGGGAGG ACGACTTTAG CACCGAATCG GCCATTAGTT TCGATATGGC CTATACCATG
ACTGACTTAA CCTTTAATGG CGGTGAGTGG CGCAACGAAG TGAAGCTTGG GTTTGAAAAG
CTGTTTGCGA CCGAGTTTTA TCAACCCTTG GACAGGGATC AAGATTTTTA TAGCCGAGCA
CGTTATCAAT ACGATATCCA TAACTGGGAT CTATACGATA ACAATAACCG CGCCCTTATC
TTCGATAAGA AGACCCACAC TGTTGAACTG GGCATTGGCT ATAACTATAT TTTTCAAGGT
TTTGTTGAGC TAGGTTTGGT GGCTGAAAAG GGCGTTATCG TTAATGATGC CTGGTTGATT
AAGGATTTCG ATTTTAAATC CTATGGCGCT TACTTAAGAG CGGGTTATGA CAGTTTAGAC
AGTATCAGCT TCCCGACATC GGGCAACCGT ATCACCTTAA ACGTCTATGT GCGTAACGAA
GATTTTGACG ATATTGTCGA TAACAATGAA AACGAATATA GCGTGCAGAT TGAGGCCGAT
TGGAAGGGGG CGCTCAGCGT AGGTAATCAT GCCTTTGTGG GGAAAGCCTC GGTTGCGACC
AACAATAACG ATGGGCTTAA TACCTTACAC TTGTCGGATT TAGGGGGATT CTTAAATCTT
TCTGGCTATC ACAAGGACTC GCTGACTGGC GCCCATAAAC TCTTTGGCGC CTTTGTTTAT
CAGTATGATT TAGGCCGTGA CGCCTTAGGA ATGACGGATT ATCCGCTCTA TTTAGGCTTA
AGTTTAGAGG CGGGGAATGT CTGGTTTGAG CGAGATGAAG TCTCACTCTC GGATCTGATT
TACGCCTCAA GCCTATACAT AGGCACAGAT ACCTCCATGG GGCCGGCAGC ATTGGGTTTT
GGTGTGACCG ATATGGGTGA TAAATCCATG TATTTATTCA TTGGTAAGGC GTTCTAA
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| Protein sequence | MMRRIFASVF LCLLLTPLYA AERPKVGLVL SGGGAKGAAH VGVLKILEEH QIPVDYIAGT
SIGAYVAGMY SLGYSASEVE AIMMGVDWDS GYSDTIPRNV LSYRDKQLRD RYNIPLNIGY
NEGEVRAPSG LLRGQTMSQL LRQSTDLVQQ FGDFDELAIP YRAVATDLET SLPVVLNHGS
LVKAMQASAT VPGALQPTQI DGKLLVDGGI ANNMPVDVVK AMGADIIIAV DIGSPLVTKD
KLDSTIAVLD QLSNFLTNAS TEKQKQLLTD RDVLIRPAID ALSTTDFTIM PLALTLGKEA
ANGQLDKLQS MSVSAEEYAA YVEAKKVKGK KLMADVAHPI QEIVFDNQSK VSLNLLKETL
DLKAGQAVTK DELNEALKRI YSLNKFERVD AEFIESEEGR VLTVTTRAKS WGPNYFQLGF
NWEDDFSTES AISFDMAYTM TDLTFNGGEW RNEVKLGFEK LFATEFYQPL DRDQDFYSRA
RYQYDIHNWD LYDNNNRALI FDKKTHTVEL GIGYNYIFQG FVELGLVAEK GVIVNDAWLI
KDFDFKSYGA YLRAGYDSLD SISFPTSGNR ITLNVYVRNE DFDDIVDNNE NEYSVQIEAD
WKGALSVGNH AFVGKASVAT NNNDGLNTLH LSDLGGFLNL SGYHKDSLTG AHKLFGAFVY
QYDLGRDALG MTDYPLYLGL SLEAGNVWFE RDEVSLSDLI YASSLYIGTD TSMGPAALGF
GVTDMGDKSM YLFIGKAF
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