Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3592 |
Symbol | |
ID | 4257977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4261487 |
End bp | 4264159 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124276 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_739629 |
Protein GI | 114049079 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00103358 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.840175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACT GTCAGCTTCA ATTGAGAAGA CGTGCAGTTT CGTTGTTAGA GCGCCAAACA AAGAGGAATG TTGCCGTGCT AGAAGCATAT CGTAAACACG TCGCAGAACG TGCTGCAGAG GGCGTAGTCC CTAAGCCATT AGATGCACAT CAAGTGGCTG AACTGGTTAA ATTGGTTCAA AATCCCCCCG CTGGTGAAGA AGCCGTTATT CTTGACCTGC TAGAAAATCG AATTCCCCCC GGTGTTGACG AAGCCGCTTA TGTAAAAGCC GCTTTCTTAG ATGCGGTTGC TAAAGGCACT GCAACTTCAC CTATCCTGTC TGCCGAACGT GCGACTGAGT TATTAGGCAC CATGCAAGGT GGCTATAACA TCGAGCCGCT GATCGCTCAG TTAGATAATC CAGCTCTGGC ACCATTAGCC GTTAAAGCAC TGTCTCACAC TCTGCTGATG TTTGATTCTT TCCACGATGT GGTTGAGAAA ATGGAAGCGG GTAACGCCTA TGCTAAACAA GTGGTTGAAG CTTGGGCAAA TGCAGACTGG TACTTAAGCC GTCCAAAATT AGCGGACAAA GTGACTCTGA CAGTATTCAA AGTCTCAGGT GAAACCAACA CCGACGACCT GTCACCGGCT CCTGATGCTT GGTCACGTCC AGATATCCCA TTGCACGCCT TAGCTATGCT GAAAAACGCG CGTGATGGTA TCGAGCCAGA TGTACCAGGC AGCGTAGGTC CAATCAAGAA ATTAGAAGAA CTGAAAACCA AAGGTTTCCC ATTAGTTTAC GTGGGTGACG TTGTGGGTAC AGGTTCATCA CGTAAGTCAG CGACTAACTC AGTACTGTGG TTCATGGGCG ATGATATCCC ATTCGTACCT AACAAACGTG CTGGTGGTTT CTGCTTAGGT GGTAAGATTG CGCCGATTTT CTTCAACACT ATGGAAGATG CGGGCGCACT GCCAATCGAA CTTGACGTCA GCAAAATGGA AATGGGCGAT GTAATCGACA TTTATCCATA CGCTGGTGTT GTTAAGCGTC ATGGCACAGA GGAAGTCATT TCTGAGTTCA GCCTGAAAAC CGACGTATTG TTAGACGAAG TGCGTGCGGG TGGTCGTATT CCACTGATCA TCGGTCGTGG TTTAACTGAC AAAGCTCGCG CAGTATTAGG TTTACCTGCT TCTGAAGTAT TCGTACGTCC ACAGGATATC GCTGATTCTG GCAAAGGTTA CACCCTTGCG CAGAAGATGG TTGGTAAAGC CTGTGGTGTT GCTGGCGTGC GTCCAGGCCA ATACTGCGAA CCTAAGATGA CTTCTGTCGG TTCTCAGGAC ACTACCGGTC CTATGACCCG TGACGAGCTG AAAGACTTAG CCTGTTTAGG TTTCAGTGCA GACCTGACTA TGCAGTCATT CTGCCACACT GCGGCTTATC CAAAACCAGT TGACGTTAAC ACTCACCACA CTCTGCCAGA CTTCATCATG AACCGTGGCG GTGTGTCTCT GCGTCCAGGT GATGGTGTTA TCCACTCTTG GTTAAACCGT ATGTTATTAC CAGACACAGT TGGTACTGGT GGTGACTCAC ATACGCGTTT CCCAATCGGG ATTTCATTCC CAGCAGGTTC TGGTTTAGTG GCATTCGCTG CCGCGACCGG TGTGATGCCT CTGGACATGC CAGAATCAGT ATTAGTTCGC TTCAAGGGCA AGATGCAACC TGGCATCACC CTACGTGACC TAGTGCACGC GATCCCATTA AAAGCGATTG AAATGGGTCT GTTGACCGTT GAGAAGAAAG GTAAAGTGAA CATCTTCTCT GGCCGCGTAC TGGAAATCGA AGGCTTAGAA ACCCTGAAAG TAGAACAGGC ATTCGAACTG TCTGACGCTT CTGCAGAACG CTCTGCAGCG GGTTGTACTA TCAAGTTAGA CAAAGAGCCA ATCATCGAGT ACCTGAACTC GAACATCACT ATGCTGAAGT GGATGATCGC CGAAGGTTAC GGTGACCGTC GTACTATCGA ACGTCGTATC AAAGGCATGG AAGAGTGGTT AGCGAATCCT GAGCTGATGA GCGCAGACGC CGATGCTGAG TATGCTGCGG TGATCGAAAT CGATCTGAAC GAGATCAAAG AGCCAATCCT GTGTGCGCCA AACGATCCAG ACGATGCAGT ATTACTGTCA TCTGTTGCGC AAACTAAGAT TGACGAAGTG TTCGTAGGTT CTTGTATGAC TAACATCGGT CACTTCCGTG CGACCGGTAA GATGTTAGAC AAGTTCGCTA AGACGCTGCC AACACGTCTG TGGATTGCAC CACCGACTAA GATGGACAAA GACCAGCTGA CCGAAGAAGG TTACTACGGT ATTTTCGGTC GCGTTGGTGC GCGTATCGAG ATCCCAGGCT GTTCACTGTG TATGGGTAAC CAAGCACGTG TGGCTGAAGG TTCTACAGTG GTATCGACTT CTACCCGTAA CTTCCCGAAC CGTTTAGGTA CAGGCGCTAA CGTTTACTTA GCCTCTGCGG AATTAGCGGC AGTAGCAGCC CTGTTAGGTC GTCTGCCATC GGTTGAAGAA TACCAAGAAT ACGCGAAAGA GTTAGATGCA ACTGCAGCTG ACACTTACCG TTACTTGAAC TTCGATCAAA TCGATTCTTA CACTCAGAAA GCATCACAAG TGATCTTTCA ATCAGCTGTA TAA
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Protein sequence | MSDCQLQLRR RAVSLLERQT KRNVAVLEAY RKHVAERAAE GVVPKPLDAH QVAELVKLVQ NPPAGEEAVI LDLLENRIPP GVDEAAYVKA AFLDAVAKGT ATSPILSAER ATELLGTMQG GYNIEPLIAQ LDNPALAPLA VKALSHTLLM FDSFHDVVEK MEAGNAYAKQ VVEAWANADW YLSRPKLADK VTLTVFKVSG ETNTDDLSPA PDAWSRPDIP LHALAMLKNA RDGIEPDVPG SVGPIKKLEE LKTKGFPLVY VGDVVGTGSS RKSATNSVLW FMGDDIPFVP NKRAGGFCLG GKIAPIFFNT MEDAGALPIE LDVSKMEMGD VIDIYPYAGV VKRHGTEEVI SEFSLKTDVL LDEVRAGGRI PLIIGRGLTD KARAVLGLPA SEVFVRPQDI ADSGKGYTLA QKMVGKACGV AGVRPGQYCE PKMTSVGSQD TTGPMTRDEL KDLACLGFSA DLTMQSFCHT AAYPKPVDVN THHTLPDFIM NRGGVSLRPG DGVIHSWLNR MLLPDTVGTG GDSHTRFPIG ISFPAGSGLV AFAAATGVMP LDMPESVLVR FKGKMQPGIT LRDLVHAIPL KAIEMGLLTV EKKGKVNIFS GRVLEIEGLE TLKVEQAFEL SDASAERSAA GCTIKLDKEP IIEYLNSNIT MLKWMIAEGY GDRRTIERRI KGMEEWLANP ELMSADADAE YAAVIEIDLN EIKEPILCAP NDPDDAVLLS SVAQTKIDEV FVGSCMTNIG HFRATGKMLD KFAKTLPTRL WIAPPTKMDK DQLTEEGYYG IFGRVGARIE IPGCSLCMGN QARVAEGSTV VSTSTRNFPN RLGTGANVYL ASAELAAVAA LLGRLPSVEE YQEYAKELDA TAADTYRYLN FDQIDSYTQK ASQVIFQSAV
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