| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3577 |
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| Symbol | |
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| ID | 4257962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4241630 |
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| End bp | 4242802 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124261 |
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| Product | major facilitator transporter |
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| Protein accession | YP_739614 |
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| Protein GI | 114049064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAATG TAGCGTTAAC TCAATCGACT CAAAAGCCAG GACTTTTTGT ACCTGTTACG
GGCTTAAGCC TATTTGCCCT CGCGTCGGGC TATTTGATGA GTTTGATCCC GCTGTCGCTC
AGTTATTTCG AACTCAGCCC AGATCTCGCG CCATGGCTCG CGAGTATTTT CTACCTAGGC
TTATTACTGG GCGCTCCTTG CATCGCGCCA ATCGTGGCGC GCATCGGCCA CAGCAAAGCT
TTTATTTTAT TTATCAATAT CTTATTGTGC AGCGTTGTGG TTATGGTTTT GCTGCCACAG
GGCGGTATCT GGCTCGCCTC GCGACTGGTT GCTGGTGTCG CGGTGGCAGG GATTTTTGTG
GTCGTCGAAT CTTGGTTGCT GATGGCCGAC ACCCAAAAAC AGCGGGCCAA ACGCTTAGGC
CTGTACATGA CCGCCCTGTA CGGCGGCACG GCAATAGGAC AACTCGCGGT CGATTACTTA
GGTACCAGGG GTAACCTTCC CTATTTAGTG GTGATAGGTT TACTGGCCGC CGCCAGTTTA
CCCGCGCTCT TAGTCAAACG CGGTCAACCG CAATCGAGCG AGCAACACTC GATTGCCCTC
TCGGATCTTA AAAACCTGAG TAAACCCGCC GTGGTCGGTT GTTTAGTCTC GGGATTATTG
CTCGGCCCCA TTTACGGCCT ATTGCCTGTT TATGTGTCGC AGGACATGGG ATTTGCCCAG
CAGACGGGGC AATTTATGGC GCTGATCATT ATGGGCGGCA TGATAGTCCA GCCCTTAGTC
AGCTATTTAT CTCCACGCTT CCAGAAGAGC GCCTTAATGG CCGCCTTCTG CTTAATTGGC
GCTGCGGCAC TCTTTTTACT GACACAGAAA TCCCTCGTTG GACTCTGGTT AGGCTTTGTG
TTGCTGGGCG CCTGTGCCTT TGCCCTCTAC CCTATCGCCA TCAGCCTGGC CTGCGATCAT
CTGCCTAGCA GCCAAATAGT ATCTGCAACT CAGATTATGT TGCTCAGTTA TTCCGTCGGT
TCGGTTATCG GCCCAGTTAC AGCGAGTCGC TTTAATCATA TCGAACATGG CTTGTTACTC
TACTTAGCCG CCAGTTTTGT ACTGACATCT TGTTATCTTG GCGCGCGCTT ACTGGTGCGA
AGCAAACCTC GCTTGCCGAC GGCAAAAGCT TAA
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| Protein sequence | MENVALTQST QKPGLFVPVT GLSLFALASG YLMSLIPLSL SYFELSPDLA PWLASIFYLG
LLLGAPCIAP IVARIGHSKA FILFINILLC SVVVMVLLPQ GGIWLASRLV AGVAVAGIFV
VVESWLLMAD TQKQRAKRLG LYMTALYGGT AIGQLAVDYL GTRGNLPYLV VIGLLAAASL
PALLVKRGQP QSSEQHSIAL SDLKNLSKPA VVGCLVSGLL LGPIYGLLPV YVSQDMGFAQ
QTGQFMALII MGGMIVQPLV SYLSPRFQKS ALMAAFCLIG AAALFLLTQK SLVGLWLGFV
LLGACAFALY PIAISLACDH LPSSQIVSAT QIMLLSYSVG SVIGPVTASR FNHIEHGLLL
YLAASFVLTS CYLGARLLVR SKPRLPTAKA
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