| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3576 |
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| Symbol | |
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| ID | 4257961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4240372 |
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| End bp | 4241409 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638124260 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_739613 |
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| Protein GI | 114049063 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA GTTTTAACCC CTTAAACTTA TCTGATAAAG CGAAAGGACA TCAAATAAGC
CTCCCCGTGG AATTTGTGCA GGCGCTTGCC GTAGCAACCT CCCTCCAAGA AGTCCTCGAT
AATGTTTCCC AATGGATATA TCAATTATTT GATGCTGAAA GGGTTAGCAT TACCTTGAAG
GACGATGCTG ATTATTTAAA AATCTACTCC ATCAGTGGTA ATAAGGCGAT CCCGCTCGAT
TTTAGGGTGC CTATCGCTAA TAGCTTTGTC GGTCAGGCCT TTTCAGAAAA GACTGTGCTT
ATTTGCGACG ACCTCACTAA ATCAACCAAG TTGGATGGCC TCATGCTGGC GCAGAATGGC
ATGAATACCA GCATGAATGC CCCACTCCTT TATGGAAATA TTTGTTTGGG CACACTCAAT
GTCGCCCATA ATAAGCCTTA TCATTACAAA GATTTAGACG CCTTAGAGTT GCAGTGTTTA
GCTAATTTGA TTGGCCTTAA CATCAGCCTG CGCCTGCAAC TTAAAGAACT CGAATACCTT
GCCTCAACAG ACCACCTGAC AGGCGCTGGT AATCGCCGGG TATTTACCCA AAAAATCCTG
CAAGCCATAG ATACATTCCA TGAAAAGGGA CAACTCTTTT ATTTTGGTTT GTTGGATATA
GACCATTTTA AGATGCTCAA TGATCAATTT GGCCACACCG CAGGAGACTA TGTATTACAG
AAAATTGTCG CCATATCTGA AGCCATGATG ACGAGCTCCG CGGAACTATT TCGCATTGGC
GGTGAGGAGT TTGCCATTAT ATTCCCTGAG CAAACCGAGT ATGAGCCTAT GCAATTTTTT
AACGATATCA GGGAAGCCAT TGCCAAGGCG GCTTTGGACT TCGACGGCAT ACCGATCAGC
GTCAGTGTAA GTATCGGCTT TACCACTATG AGCACTGCGG ATTATGCTCC GGAATCCTTA
CTGCGCCGCT CGGATAAGGC ACTCTATCAG GCAAAGCTGG CAGGGAGAAA TCGTGTGGTG
ATGTTTAATA CAGCATAA
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| Protein sequence | MEKSFNPLNL SDKAKGHQIS LPVEFVQALA VATSLQEVLD NVSQWIYQLF DAERVSITLK
DDADYLKIYS ISGNKAIPLD FRVPIANSFV GQAFSEKTVL ICDDLTKSTK LDGLMLAQNG
MNTSMNAPLL YGNICLGTLN VAHNKPYHYK DLDALELQCL ANLIGLNISL RLQLKELEYL
ASTDHLTGAG NRRVFTQKIL QAIDTFHEKG QLFYFGLLDI DHFKMLNDQF GHTAGDYVLQ
KIVAISEAMM TSSAELFRIG GEEFAIIFPE QTEYEPMQFF NDIREAIAKA ALDFDGIPIS
VSVSIGFTTM STADYAPESL LRRSDKALYQ AKLAGRNRVV MFNTA
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