Gene Shewmr7_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3574 
Symbol 
ID4257959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4238317 
End bp4239720 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content49% 
IMG OID638124258 
Productanion transporter 
Protein accessionYP_739611 
Protein GI114049061 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTT TAGAGCAGTC AACGTCGGTT CCCCCCAATC ATTCGCCCGC GAATGCCGGG 
CTTGAAAAGA AAAAAATGCT GATCTTAGTA GCGGATATTC TGCTGCTATT CGCGTTGTAT
TACGGTTTAC CCTTTGACCA AGGGGTCAAT ACAGGGCTTG CTATCTTAGT GTTCGCCGCC
ATCTTGTGGT TAAGCGAAGC TATTCACATC AGTATCACGG CGATTTTAGT GCCGATTTTG
GCGGTATTCT TTGGAGTGTT TGAAACCAAA GAAGCCATGA GTAACTTTGC CAATCCAATT
ATCTATCTGT TTTTCGGTGG TTTTGTATTA GCAGCTGCGC TGCACCATCA AAAGATCGAT
ACCCTGATAG CGCAAAAATT ATTGCTGGCC TCCAAGGGTA AACTCAGTAT TGCCTGTTTA
ATGCTGTTTG GCGTGACGGC GTTACTGTCT ATGTGGATAA GTAACACAGC AACCACGGCG
ATGATGTTGC CACTCGCACT GGGAATTTTG CAGCAGCTCG ATCGCAAGAT GTACCACAGC
ACTTACGTAT TCTTACTGCT TGGGATTGCC TATTCAGCCA ACATTGGTGG CATTGGTACC
TTAGTCGGCA GCCCGCCAAA CGCGATTGCC GCAGCGCAGG TCGGCCTGAG TTTTAGCGAT
TGGCTGAAGT TTGGCATTCC AACGGTGATC TTGATGTTAC CTATGATGCT TTTGGCACTC
TACTGGTACT TTAAGCCGGA TCTATCAGCG CAATGTAAGC TAGATGTTGA AGAACAAAAA
CTGACTTTCC AAGGCAAACT CACCTTAGTT ATCTTCCTCG CGACGGTTTG TTGCTGGATT
TTCAGTGTGC CGCTGGCCAA AGCGCTCGGT GGGATCACGC AATTTGATAC CATAGTCGCC
CTTGGCACTG TGGTGTTGCT GGCGGGACTC GGGCTTGTGG GTTGGAAGAA GATTGAATCG
ACCACTGATT GGGGCGTATT GATCCTGTTC GGTGGTGGTT TAACCTTGAG CGCAGTGCTC
AAAAGTACTG GTACCAGCGT GTTCCTCGCG CACTGGATGA CGGATATTTT TGGTAGCACC
CATATGTCGC TGTTCGTGTT TGCGGTAATC GCCTTTGTGG TGATGCTGAC CGAGTTTGCC
AGTAATACCG CAAGTGCCGC GCTGTTAGTG CCTGTATTTG CGGCGATTGC CGAAGCATTA
GGAGTATCGC CAGTGATGCT ATCCGTGCTG ATTGGTATTG CGGCTTCCTG CGCCTTTATG
TTACCTGTGG CGACGCCGCC CAACGCCATT GTTTACGGCT CAGGCTATAT TAAGCAGTCG
GAAATGGTGC GAGTGGGCAT GATAGTTAAC TTCCTCAGCA TGATAGTGCT GGGCATTATT
GCCCACACCT TCTGGGAAGT GTAA
 
Protein sequence
MSSLEQSTSV PPNHSPANAG LEKKKMLILV ADILLLFALY YGLPFDQGVN TGLAILVFAA 
ILWLSEAIHI SITAILVPIL AVFFGVFETK EAMSNFANPI IYLFFGGFVL AAALHHQKID
TLIAQKLLLA SKGKLSIACL MLFGVTALLS MWISNTATTA MMLPLALGIL QQLDRKMYHS
TYVFLLLGIA YSANIGGIGT LVGSPPNAIA AAQVGLSFSD WLKFGIPTVI LMLPMMLLAL
YWYFKPDLSA QCKLDVEEQK LTFQGKLTLV IFLATVCCWI FSVPLAKALG GITQFDTIVA
LGTVVLLAGL GLVGWKKIES TTDWGVLILF GGGLTLSAVL KSTGTSVFLA HWMTDIFGST
HMSLFVFAVI AFVVMLTEFA SNTASAALLV PVFAAIAEAL GVSPVMLSVL IGIAASCAFM
LPVATPPNAI VYGSGYIKQS EMVRVGMIVN FLSMIVLGII AHTFWEV