| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3571 |
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| Symbol | |
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| ID | 4257956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4236167 |
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| End bp | 4237153 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124255 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_739608 |
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| Protein GI | 114049058 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGCGG ATTCTGCAGC ACAAATAAAG CAACTTCAGG CCGAAATCGC CGAGCTTAAA
CGTGAAAATG CGCGGTTAAC GGCGCTCAAT AATCGCGCCG AAGAAAAACT GTTTGCCGCC
CTCGATGGCA ATAGCTTGTG TTTGTGGGAG CAGCATGTTC CCAGTGGCAA TCTCACCCTG
TTCAATGTGA AGTGGGGCGA ACTGCTCGGC TTTAGCCGCG AGGAGCTTCG CGCCCATGTC
GACAGCTGGA AAAGCAAACT TCATCCAGAG GATAAAGACT GGGTCATCAA AGCCTTTGAA
GACCATGTGA ATGGTAAGGC CGATTATTAT CAGGTCGTAC ATCGCATGCT GCACAAAGAT
GGCAGCATCA CTTGGGTGTC GGATCGTGGC CGTATTGTTG AGCGTCTACC CGATGGCACG
CCGCTGCGAA TGATGGGCAG CCATATCGAT ATCACTCAAG AAAAGCGCTA CGAGCTGGAT
TTAGCTCGGT TAGCTCATAG CGATCCTCTC ACCAACCTGA TGAACCGCCA AGCCATCACC
ACGGCCTTCG ATGAGTTATT GCAACCCGGC CAGCGCGGGG CGTTGTTCTT TATCGATCTT
GATGGTTTTA AAGCCTTAAA TGATCACCAT GGCCACAAGT TTGGCGATAA CTTATTGGTG
CATGTGGCGC ATTCCTTAGT GGAACATTCG GGCGTGCAGG CGAAGATCGC GCGGCTCGGC
GGGGATGAGT TTGTGATTGT CCTGCCTTCT TCGGATATCG AAGCCTTAGG TATGCTCGCG
CAATCCTTAT TGGATGTTTA TCGACAACGT TTCTTACTCG ATGGTTGCGA GGTGGCGATT
AGCCTGAGTA TTGGTATCGA TATTTTTGAG TACGGTGATC GTTTTGCTCA AAGCTGCGAT
CGCGCCGATG CCGCTATGTA TTGTATTAAG CACCAAGGGA AAAACGGCTA CAGCTTCTCT
CGGAATGAGA GCGCTATTGA CCGTTAA
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| Protein sequence | MVADSAAQIK QLQAEIAELK RENARLTALN NRAEEKLFAA LDGNSLCLWE QHVPSGNLTL
FNVKWGELLG FSREELRAHV DSWKSKLHPE DKDWVIKAFE DHVNGKADYY QVVHRMLHKD
GSITWVSDRG RIVERLPDGT PLRMMGSHID ITQEKRYELD LARLAHSDPL TNLMNRQAIT
TAFDELLQPG QRGALFFIDL DGFKALNDHH GHKFGDNLLV HVAHSLVEHS GVQAKIARLG
GDEFVIVLPS SDIEALGMLA QSLLDVYRQR FLLDGCEVAI SLSIGIDIFE YGDRFAQSCD
RADAAMYCIK HQGKNGYSFS RNESAIDR
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