Gene Shewmr7_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3562 
Symbol 
ID4257947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4227665 
End bp4228072 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID638124246 
ProductNUDIX hydrolase 
Protein accessionYP_739599 
Protein GI114049049 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTG AAGATAGATT TCGGCTCAGT AGCCATGGGG TGATCACGAA CGATGCAGGC 
CAAGTGTTAC TCCTTAAGGC AAATTACGGC AATTGCGCCT GGGGCTTACC CGGCGGCGCC
TTAGAGCCCG GCGAAACGAT TCACGAAGCC CTGCTGCGCG AATGCCAAGA GGAACTGGGG
CTGGCGGTGA ACGTCCACTA CCTAAGCGGC GTGTATTATC ACAGCACCTA TCAATCCCAA
GCTTTTATCT TTCGTTGTGA GTTTGCATCT GCCGACGCAG TGATTCGCTT AAGCCATGAA
CACTCAGAGT TTACCTTCCA TGATATCGAC ACACTTAGCG CGGTCCAGCA GCAAAGAGTT
AAAGATTGTC TTAATTTCAA CGGGGTTGTC GTGAGTGCAA AGTTTTAA
 
Protein sequence
MAFEDRFRLS SHGVITNDAG QVLLLKANYG NCAWGLPGGA LEPGETIHEA LLRECQEELG 
LAVNVHYLSG VYYHSTYQSQ AFIFRCEFAS ADAVIRLSHE HSEFTFHDID TLSAVQQQRV
KDCLNFNGVV VSAKF