Gene Shewmr7_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3559 
Symbol 
ID4255865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4224029 
End bp4225342 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content44% 
IMG OID638124243 
Producthypothetical protein 
Protein accessionYP_739596 
Protein GI114049046 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.856914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCA ACCTACTCAA CGCCTTAATA GCATGGAAAA ACCAACCTGT GCGCAAGCCA 
TTATTGATCG ATGGCGCAAG GCAAACGGGT AAAACCTATC TGCTGCAAGA GTTGTTTGGT
AACACCTTTG CCAACATCCT GCGTATCGAC TTTCTTGAAA ATCCCGCCTA CAAACAAGCA
TTCGATGGCT CACTGTCACC AGACGAGCTA ATAATGAACA TTGAGCTGTT GACCAATCAG
GCGTTCAACC CAGAAACCGA TCTGCTGATA TTAGATGAAA TTGGCGAATG TGAGCGTGCC
GTTACCTCAC TAAAGTATTT TGCTGAAAAA GCACCGTCCT ATTTTGTCGC GGCAAGCGGC
TCGAACATTG GTTTGCTCAA CACCTTCCCT GTAGGTAAGG TAGAACAATA CAATTTACGA
CCTCTGACCT TCCAAGAATT TATTTACGCA TCCAACGAGC AAGCACTGAT CAAAGCGTTT
GAAGCCCAAG CAAGCACACC GGCGGTGCAC ACTAAATTGA TGGATAAACT TACAGATTAC
TTTTTTACCG GTGGTATGCC AGAAGCCGTT TCCGCTTGGT ATAGGTTTAA AGATTCAAGC
ATTTTAGAGC GGGTTGAAAA AGTCACAAAA ATTCATGCCG ATTTAGTTGA AGGTTATCGC
CGCGATTTTG GCAAGTACGC GGGCAAGGTC AATGCCACAC TGATTGAATC TGTGTTTAAC
AGTATTCCAG CGCAGTTATC ACTTGTCAGC GATGAGTCCG TTAAACGCTT TAAATTTAAA
CATGTGCATG AGCGCAAATC TCGTTATAGC GATTTTGAGA CCGCGATCCA TTGGCTTAAC
TGCTGCCGCT TAGCCTTGCC AAACTATCCT ATTGAAGGGA TACCAAAATC ACCGCTGGCG
GCCTACAAAA AAGAAAATAT GGTTAAACTG TTTCTATTTG ATGTGGGACT GCTCAATCAT
ATGCTGGGCA GCAGTTATAA AGAGATTAAG CAACAAAATT ACGAATACAA AGGCTATGTG
GCTGAAAACT TTGTGCAGCA AGAGCTCACT GCTATTGGCG TTGACCCAAG TTATTCATGG
AATGACGCCC GCGCCGAAAT CGAATTTATT TTGGGAACCG ATGAAGGCAA TATCGTCCCT
GTTGAAGTCA AAAGTGGCAA ACGTACCAGA GCTAAATCGT TGGCATCCTA CGTTGAAAAA
TGTACTCCAA GTAAAACCTT TAAGTTAACG GGCACACAAG GCTCATCGGC GTTAGAACAA
ACCAATATTG TAATGCCTTT GTATTTCACC CAGTATTTAC CACAGAGATG GTAA
 
Protein sequence
MQRNLLNALI AWKNQPVRKP LLIDGARQTG KTYLLQELFG NTFANILRID FLENPAYKQA 
FDGSLSPDEL IMNIELLTNQ AFNPETDLLI LDEIGECERA VTSLKYFAEK APSYFVAASG
SNIGLLNTFP VGKVEQYNLR PLTFQEFIYA SNEQALIKAF EAQASTPAVH TKLMDKLTDY
FFTGGMPEAV SAWYRFKDSS ILERVEKVTK IHADLVEGYR RDFGKYAGKV NATLIESVFN
SIPAQLSLVS DESVKRFKFK HVHERKSRYS DFETAIHWLN CCRLALPNYP IEGIPKSPLA
AYKKENMVKL FLFDVGLLNH MLGSSYKEIK QQNYEYKGYV AENFVQQELT AIGVDPSYSW
NDARAEIEFI LGTDEGNIVP VEVKSGKRTR AKSLASYVEK CTPSKTFKLT GTQGSSALEQ
TNIVMPLYFT QYLPQRW