| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3558 |
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| Symbol | uvrD |
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| ID | 4255864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4219402 |
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| End bp | 4221570 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638124242 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_739595 |
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| Protein GI | 114049045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.231339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.569551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT TGACGGCCTA AATGATAAAC AGCGTGAGGC TGTTGCGGCA
CCGCAATCTA GCATGTTAGT GCTTGCGGGC GCAGGCAGTG GCAAAACGCG AGTATTAACC
CACCGTATCG CGTGGTTAAT GCAGGTTGAA CAGCAGAGTC CTTACTCGAT TTTAGCCGTG
ACGTTTACCA ATAAAGCCGC GGCCGAGATG CGCGAGCGGG TTGAAAAAGT CGCTGGTACC
AATATGGGGC GGATGTGGAT TGGTACTTTC CACGGGCTGG CGCATCGTTT ATTACGCACT
CACTTCCAAG ATGCGGATTT ACCGCAAAGC TTCCAAATTC TCGATTCGGA CGATCAGGTG
CGCTTGCTGA AACGCATCCT TAAAAGTTTG AATCTGGATG AAAAACAATA TCCTCCCCGT
CAGGCGCAGG CCTATATCAA TGGCAAGAAA GACCAAGGTT TGCGGCCCAA GCATATCGAT
GCGGGTGGTT TTCCGATTGA GCAAAACCTG CTGAAGATTT ATCAGGTTTA TCAAGAGTCT
TGCGACCGCG CGGGTTTAGT CGACTTTGCC GAAATCCTGC TGCGTGCCCA CGAGCTGTGG
CTCAATAAAC CGCATCTGCT GGCGCATTAT CAGGAGCGTT TTAAGCATAT TCTGGTGGAC
GAGTTCCAGG ATACTAACGC CATCCAATAT GCGTGGATCC GCGTGCTGGC AGGCCAAACC
GCTAACGTGA TGATAGTGGG TGACGACGAC CAATCCATTT ACGGTTGGCG CGGCGCTCAG
GTTGAAAACC TGCACCGCTT CCTGCGGGAT TTCCCCACGG CGACTACGAT TCGCCTCGAG
CAAAATTATC GCTCCAAGGG CAATATTTTG AAGGCGTCGA ACGCCCTTAT CGCCAATAAC
CCCGAGCGTT TAGGTAAAGA GTTGTGGACC GACGAAGCCG ATGGTGAGCC GATTTCCCTC
TACTGCGCCT TTAACGAAAT GGACGAGGCG CGCTTTATTG TCGGTCGTAT CAATGATTGG
TACGAAAAAG GCGGCAATTT AAGTGACTGC GCGATTTTAT ATCGCTCAAA CGCTCAGTCG
CGCGTGCTCG AAGAAGCCTT ATTACACAAA GGCTTAGCCT ATCGTATTTA CGGTGGCCTG
CGCTTCTTCG AACGCCAAGA GATTAAAGAT GCTATGGGTT ATATGCGTCT TATCAGCAAT
AAAAATGACG ATGCCGCCTT CGAGCGCGTG GTCAATACGC CGCCCCGTGG CATTGGCGAT
CGCACTCTAG ATATTTTACG CACTACCGCG CGTCAGCAGG AACTCACCCT GTGGCAGGCT
TGTTTACGTT TGCTGGATGA AAAGGTGCTC GCAGGCCGAG CCGCCTCGGC GGTACGTGGC
TTTATGGATC TTATAGTTAC CCTGCAGGAA GAAACTCAGG ATATGGCGCT GTACCGGATG
ACGGACACAG TGATCCAAGC CTCTGGGCTT AAGGCCATGT ACGAGGCGGA GAAAGGCGAA
AAGGCCCACG CCCGTATCGA AAACTTAGAG GAACTCGTTA CTGCGGCGCG CACCTTCGAA
ATGCCAGAGG AGCTTGAGGA TATGGGCGAG CTTAACGCCT TCCTATCCCA TGCGGCCCTA
GAGGCGGGCG AAGGTCAGGC CGATGCCTTT ACCGATGCCG TACAGTTGAT GACACTGCAC
TCGGCCAAGG GGCTGGAGTT TACCATGGTG TTTATGGCGG GCGTCGAGGA GGGGATTTTC
CCGAGTAAGA TGGCGCTCGA AGAGGGCGAC AGACTCGATG AGGAACGCCG CCTCTGTTAC
GTGGGCATGA CCCGCGCGAT GGAAAAACTC TATATCACCT ATGCCGAATC CCGCCGTATT
TATGGCCGTG AAGATTATGC CCGTCCATCG CGTTTTATTA AGGAAATTCC GCCGCAATAT
GTGGACGAAA TTCGCTTAAA AGCGCAGGTG TCAACGCCGA TGGCCAATAA TCGCTTCAGC
GCGCAAAAGT CGGCGGTCGC CAACGATACT GGCTTTAGCG TCGGCCAAAG GGTGCATCAT
CCAAAGTTTG GTGACGGTAA AGTGACTAAC TTCGAAGGCA GTGGCGCGCA GGCGCGGGTA
CAGGTGAATT TTAGTGATTT TGGCAGTAAG TGGCTGGTGG TCGCCTACGC GCGTTTAGAG
GCGCGTTGA
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| Protein sequence | MDVSSLLDGL NDKQREAVAA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGT NMGRMWIGTF HGLAHRLLRT HFQDADLPQS FQILDSDDQV
RLLKRILKSL NLDEKQYPPR QAQAYINGKK DQGLRPKHID AGGFPIEQNL LKIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFKHILVD EFQDTNAIQY AWIRVLAGQT
ANVMIVGDDD QSIYGWRGAQ VENLHRFLRD FPTATTIRLE QNYRSKGNIL KASNALIANN
PERLGKELWT DEADGEPISL YCAFNEMDEA RFIVGRINDW YEKGGNLSDC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMGYMRLISN KNDDAAFERV VNTPPRGIGD
RTLDILRTTA RQQELTLWQA CLRLLDEKVL AGRAASAVRG FMDLIVTLQE ETQDMALYRM
TDTVIQASGL KAMYEAEKGE KAHARIENLE ELVTAARTFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFTMV FMAGVEEGIF PSKMALEEGD RLDEERRLCY
VGMTRAMEKL YITYAESRRI YGREDYARPS RFIKEIPPQY VDEIRLKAQV STPMANNRFS
AQKSAVANDT GFSVGQRVHH PKFGDGKVTN FEGSGAQARV QVNFSDFGSK WLVVAYARLE
AR
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