Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3557 |
Symbol | ubiA |
ID | 4255863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4218416 |
End bp | 4219276 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124241 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_739594 |
Protein GI | 114049044 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.712542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTAA AGCAGAAGTG GGACGTGTAT TCCCGCCTGA CTCGACTCGA CCGTCCTATC GGCACTTTGT TATTGCTCTG GCCCTGTTTA ATGGCGCTGG TGTTAGCGGC GGGTGGAATG CCCGATATTA AAGTGTTGAT TATCTTTATT ATCGGTGTGG TGATCATGCG CGCCTGTGGC TGCATTATTA ACGACTATGC CGACCGCGAC CTCGACTCCC ACGTTGAACG CACTAGATCC CGTCCCCTCG CCAGTGGCGA AATCAGCACC AAAGAAGCGC TATTGCTGTT TGTGATCTTA GGTCTAGCCG CCTTTGGTTT AGTGTTACTG CTCAACGGTT TAGTGGTTAA GCTCTCTGTT GTCGGCATTA TCCTCACCAT TATCTACCCC TTTACTAAGC GGGTAACGAA CATGCCGCAG ATGTTTTTGG GCGTGGTGTG GAGTTGGTCG ATTCCCATGG CCTATGCGGC GCAAACCGGT GAAGTGCCCA TCGAAGCTTG GTGGTTATTT GCCGCCAATT GGTTTTGGAC TGTGGCCTAC GACACTATGT ACGCCATGGT CGATAGGGAC GATGATTTAA AAGTCGGTAT CAAATCGACA GCCATTCTTT TTGGCCAATA CGACCGCCAA ATCATTGGAT TATTTCAATT TGCCGCGCTG CTGTGTTTTA TCGCCGCGGG TTGGAGTGCC GACCGTGGCC TGCTCTATGG TCTAGGACTA CTTACCTTTG TTGGTTTTAG CACTTACCAA CAGATGTTGA TTTTTGGCCG CGAAAGAGCT CCTTGCTTTA AAGCCTTCCT CAACAATAAC TGGGCGGGAT TAGCACTGTT TGTTGGTTTA GGTGCCGATT ACCTGTTTTA A
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Protein sequence | MNLKQKWDVY SRLTRLDRPI GTLLLLWPCL MALVLAAGGM PDIKVLIIFI IGVVIMRACG CIINDYADRD LDSHVERTRS RPLASGEIST KEALLLFVIL GLAAFGLVLL LNGLVVKLSV VGIILTIIYP FTKRVTNMPQ MFLGVVWSWS IPMAYAAQTG EVPIEAWWLF AANWFWTVAY DTMYAMVDRD DDLKVGIKST AILFGQYDRQ IIGLFQFAAL LCFIAAGWSA DRGLLYGLGL LTFVGFSTYQ QMLIFGRERA PCFKAFLNNN WAGLALFVGL GADYLF
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