| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3554 |
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| Symbol | |
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| ID | 4255860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4215978 |
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| End bp | 4217039 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638124238 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_739591 |
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| Protein GI | 114049041 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.138776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGCC GACTAACACA ATTGTTTGGG ATCCAGTTTC CGATTATTCA AGCCCCGATG
GCGGGCGTGC AGGGTAGTGC ACTGGCGATT GAAGTATCGC AGGCAGGTGG ATTGGGCTCC
TTGCCCTGCG CTATGTTATC CCTCGAGGCG CTTGAGGCTG AGTTAACCGA AATCCGCGGC
AATACCACTA AACCTATCAA TGTGAATTTC TTTTGCCATA GTGAGCATTT ACCGCAGGCG
GCCAAGCAAG CGGCTTGGCT CGAACAGCTC TCGCCCTATT TTACTGAATT TAATCTCGAC
CCGAATGCGC AGCCTGCTGG CGCCCAGCGC ACGCCCTACA GCAAGGCGCA GGCCGAGGTG
TTAGCCAAAT TTAAGCCCGA GGTGGTGAGT TTTCATTTTG GGTTGCCCGA TGAAGAATTG
CTGCTGGAAA TCAAATCCTG GGGCTCAAAA GTTATCTCCA CGGCGACCAC TGTCGAGGAG
GCACTTTGGC TCGAGGCTCG CGGCGCCGAT GCGATTATTG CCCAGGGCCT AGAGGCAGGT
GGACACAGAG GACACTTTTT ATCCGAGGAT TTAACCGAGC AGTTAGGGAC TTTTAGTCTA
TTACCGCAGG TGATTGCGGC GGTGGATATT CCTGTGATTG CCGCCGGCGG CATTGTCGAT
GCCACCACAG TGCGTGCCGC CATGGCGATG GGCGCTTCGG CGGTGCAGGT GGGGACGGCC
TATTTACTCT GCCACGAGTG CAATACCAGC TGCATTCATC GTGAGGCGCT GCAAAGCGAC
GCCGCGCAGC ATACGGCACT GACTAACTTA TTTTCCGGTC GACCCGCTCG CGGCATAGTG
AACCGCTTTA TGGCCGAAAT GGGACCGATA AATGAGGCTG TGCCAGATTT CCCCTTGGCA
TCCTCGGCGG TTGCAGGCTT AAGAACGGCG GCGGAGCGAC AGGGATTTGG CGATTTTAGT
CCGTTATGGT GCGGCCAAAA TGCCAGTGGT TGCCGAAACA TTCCCGCAGC CGAGCTGACG
AGGCTGTTGG CTTTAGGTGT GATGGGAGCA TTATCTGGCT GA
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| Protein sequence | MPCRLTQLFG IQFPIIQAPM AGVQGSALAI EVSQAGGLGS LPCAMLSLEA LEAELTEIRG
NTTKPINVNF FCHSEHLPQA AKQAAWLEQL SPYFTEFNLD PNAQPAGAQR TPYSKAQAEV
LAKFKPEVVS FHFGLPDEEL LLEIKSWGSK VISTATTVEE ALWLEARGAD AIIAQGLEAG
GHRGHFLSED LTEQLGTFSL LPQVIAAVDI PVIAAGGIVD ATTVRAAMAM GASAVQVGTA
YLLCHECNTS CIHREALQSD AAQHTALTNL FSGRPARGIV NRFMAEMGPI NEAVPDFPLA
SSAVAGLRTA AERQGFGDFS PLWCGQNASG CRNIPAAELT RLLALGVMGA LSG
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