Gene Shewmr7_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3552 
Symbol 
ID4255858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4213514 
End bp4214434 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID638124236 
Productredoxin domain-containing protein 
Protein accessionYP_739589 
Protein GI114049039 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.679659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAC ATCGAATCAT AGTTACCTGT CTCGCCCTTA TCAGTTTTTC CACTTTTGCT 
GCCGATAAAA GCTATCAAGA TATAGTGCTA AAAACCTATC CAGATCAACA GCAAACCTCC
TTAAAAAATA TCGCTGGCGA TAAGCCGATT TACCTTAAGT TTTGGGCAAC CTGGTGTCAG
CCCTGTATGG AGCAGATGCC GCATTTTGAG GAGTTGCAGA AAAAGTATCA GGACAAGGTC
AATATCCTCG CCCTGAATAT CAATATCAAC GAAGAACAAC CTAAAATTGC CGAAGTCATC
TCCCGTTTCG GTCTGACTAT GCCTGTCTGG CTAGATAACG AGGGCGAATT GGGTGTGGCC
CTTGGCTTGG TCGGGACGCC CTATAGCGTG TTAATCAATC GCGCAGGCGA GGTGGTTTAC
ACTAGCCATG AGTCGGATGC GAACCTCGAT AAATTTATCG ATATGTTGGC CAATGGCCAA
GAACTCACGG CACAAACTAC AGATGCGCCA AGCCAAGAAC AAGCAGCTAA GCTGCTGAAA
CCTTGGGAGC AAGGTGAGCA TCTACTGTTT TTTACTGCCA CTTGGTGTGA TTGGTATTTG
GCAGAGAGTC GCCCTGAAAT GTCTCAGGCC TGTGTTGCCG CCCAGAAAGA TTTAGACAAG
CTAGCGCAAA AGTTGCCGAA CAAAGCCTGG CATGGGGTGG TGAATCATCT GTGGACGGAC
GATAAAGCCC TCGCCGATTT TAAACAGCTC TATCCTTCAC GCGTCGATTT CAGTATCGAT
GAATTAGGCG TGCTATTTAA TCACTTTAGT ATTCGCAACA TCCCGACGTT GCTTTGGGTG
AAAGACGGTA AAGTCATTGA GCGTATTACC GATTTTAGCC AGCCAGAGAA AATTGTTGCA
AGGCTCAAGG CCGCGCCATA G
 
Protein sequence
MLLHRIIVTC LALISFSTFA ADKSYQDIVL KTYPDQQQTS LKNIAGDKPI YLKFWATWCQ 
PCMEQMPHFE ELQKKYQDKV NILALNININ EEQPKIAEVI SRFGLTMPVW LDNEGELGVA
LGLVGTPYSV LINRAGEVVY TSHESDANLD KFIDMLANGQ ELTAQTTDAP SQEQAAKLLK
PWEQGEHLLF FTATWCDWYL AESRPEMSQA CVAAQKDLDK LAQKLPNKAW HGVVNHLWTD
DKALADFKQL YPSRVDFSID ELGVLFNHFS IRNIPTLLWV KDGKVIERIT DFSQPEKIVA
RLKAAP