| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3551 |
|---|
| Symbol | |
|---|
| ID | 4255857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4212202 |
|---|
| End bp | 4213296 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739588 |
|---|
| Protein GI | 114049038 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA TTATCAGTAA TGCTGCGGTG GGTCGTACCC TATTGATTTT ATTGCTGTGT
GCTGGTGTTT TCTTCTTTAT CGACTTTTTA GTGCCCGCCT TGGCCGCCCT GATCGTCTGC
TTCTCCAGTT GGCCGTTGTA TCAAAAATTA ATGGCTAAAT GCGGTGGTCG CTCTGCGCTG
TCTGCCACTA TCGCGTTAGT CTTGATTATT GTAGGGCTAA TCACGCCGCT GATTTTTGTA
TTTTCCTATG CTTTACAAGA GATTAGAGCC TGGGTGGAGT GGCTGGTATA TGCCAACCAG
CATGGCGCTC CCGTGCCGTT GTGGATTAAG GATTTACCTT GGATTGGCGA GTGGCTTACC
CTGCAATGGC AGCAGTTTAT CGGTGAACCC CATGAGCTGG GCAAGATAGT CAGTGCGATC
AGTGGCCAGA ATCTGAGTGG TATTTCCCGC TGGGTACTGC AATTGGGCTG GAATACCTTG
GGCCTGCTGC TGACCTTGCT GTTTATGCTG ATCACCTTGT TTTTCTTATA TAAAGATGGC
GAGTCGGTGG CCAAGCAGTT GGATATTGTT GGCGAGCGCA TTCTTCCCGC CCGTTGGCAT
CGATTCTCCC GCGTGGTGCC TACGACTGTG AGTTCAACGG TTATCGGCAT GACGCTTATC
GCTATCGGTG AGGGCATAGT GCTGGGGATT GCTTACTGGA TTGCGGGTGT GCCTTCGGCC
GTGGCCTTTG GGGTGTTGAC CGCGTTTATG GCCTTAGTGC CTGGCGGCGC GCCAACCATG
TTCACCTTGA TCTCACTGTA CTTAGTCGGC ACCGGCGATA TGACGGCGGG GGTGGGCTTA
TTCCTCTGGG GCAGTATCGA GCTATTTATT GTCGATAAAA CGCTGCGACC TAATTTGGTT
GGCGGGCCAA TCAAATTACC CTTCTTGCCG ACCTTTTTCG GTTTAATTGG CGGGGTCAAA
ACCATGGGGT TCGTTGGTCT GTTTGTCGGC CCTGTGTTGA TGGCGTTACT GATTGCCATT
TGGCGCGAGT GGTTAAGGGA CGATCCGAGT GCCGAGTCTG ACTCGCCAGA GGCTCCGACA
TCAGCATCCC AATAG
|
|---|
| Protein sequence | MAQIISNAAV GRTLLILLLC AGVFFFIDFL VPALAALIVC FSSWPLYQKL MAKCGGRSAL
SATIALVLII VGLITPLIFV FSYALQEIRA WVEWLVYANQ HGAPVPLWIK DLPWIGEWLT
LQWQQFIGEP HELGKIVSAI SGQNLSGISR WVLQLGWNTL GLLLTLLFML ITLFFLYKDG
ESVAKQLDIV GERILPARWH RFSRVVPTTV SSTVIGMTLI AIGEGIVLGI AYWIAGVPSA
VAFGVLTAFM ALVPGGAPTM FTLISLYLVG TGDMTAGVGL FLWGSIELFI VDKTLRPNLV
GGPIKLPFLP TFFGLIGGVK TMGFVGLFVG PVLMALLIAI WREWLRDDPS AESDSPEAPT
SASQ
|
|---|
| |