Gene Shewmr7_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3546 
Symbol 
ID4255852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4202888 
End bp4203466 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID638124230 
Producthypothetical protein 
Protein accessionYP_739583 
Protein GI114049033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA CTTGTTTAAC TCAACCTATT TATGACCACT TGTACCGTGA TATCAGTGAG 
TTTCGCAGCA CCTTCGACCT CGCCGTCAAC GATGCTAGCT CCTTGGATGA AAAGGCCGAC
ACGCTACATA CTTCACTGAT TATTGAAGAA TTAACCGAAC TTGCCGAAGC CGATAGCCGT
ATCGAACAGG CCGATGCCAT TGTCGATTCT GTGTATGTAT TAATGGGGCG TTTAGTGCAT
TTAGGCGCGG CCCAAATCAA TGACCGCCTA GAGATCAGCT ACCTTATCGA CTTGCTGCTG
TGTGTGGCTA AAAACCGTGA AATCGACTTT ATCGCCTGCT GGGATGAAGT GCATTCGAGC
AACATGAGCA AAGTGTGCCG CAATGAGCAG GAACTGACAG AGACTATCGC CTTCTATGCC
GAGCAAGGCG TTGAAATCGT TGGCAGCAAA AAGGGCGAGT TTATCATCGC CAAATGCGCT
AAGGATGTGG AAATGGCCGG TAAAGTCGTG CGCCAAGGCA AGGTATTAAA GTCAGTGTAC
TATCGCCCTG CGGATTTAAC TCAGTTAGTA AAAGCGTAA
 
Protein sequence
MKLTCLTQPI YDHLYRDISE FRSTFDLAVN DASSLDEKAD TLHTSLIIEE LTELAEADSR 
IEQADAIVDS VYVLMGRLVH LGAAQINDRL EISYLIDLLL CVAKNREIDF IACWDEVHSS
NMSKVCRNEQ ELTETIAFYA EQGVEIVGSK KGEFIIAKCA KDVEMAGKVV RQGKVLKSVY
YRPADLTQLV KA