Gene Shewmr7_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3538 
Symbol 
ID4256930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4193927 
End bp4194634 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID638124222 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_739575 
Protein GI114049025 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA ATATAGAGAG ACGGAGGTTC CTTAAAAGCG CTGGCATGTG CTCTTTGATG 
TTAACGCCTT TAGCCGGGTG TTCGGTCAAA GAAGAGTCCG ACGGCGCCCA TAAGCCCCAT
TACGTCATGG TCTTTGACCA AAACAAGTGT GTCGGCTGTG GCGACTGTAA AACCGCCTGT
AATCAAGCCA ACCAGTTACC CGAAGGCAAG TCACGGGTGT TGCTCGAGCA GCAGAGTGGT
CGTGTCGAAG GCCAGCCTTG TCCACACTGC GGCAAGATGA GTTGTGACTG TGAACGTAAG
TTTGTTCGGG TTTCCTGCCA GCAATGCAAG AACGCCCCCT GTGTGACCGT TTGCCCTACG
GGCGCGGCGC ACCGCGACGC GAAAACGGGC ATTGTGACTA TGGATGCGAG CAAATGCGCC
GGCTGCAAAT ACTGCATTGG GGCTTGTCCT TACAACGCCC GCTACATCAA CAGCGATACG
GATGTGGCCG ATAACTGCGA TTTCTGTTTG AACAGCAAGT TAGCCAAGGG CGAATTGCCC
GCCTGTGTGC AGAGCTGTAA ATACGATGCG TTGATCTTCG GTGATGCCAA CGATCCTCAA
TCCTACGTAA GCAAACTCTT AGCGGTAAAA GACTCAGTGC GGATTAAGCC GCAGTTTGGC
ACCGAGCCGA GCTTGCGTTA CATACCAATC GTCAAACTGG GAGTGTAA
 
Protein sequence
MSENIERRRF LKSAGMCSLM LTPLAGCSVK EESDGAHKPH YVMVFDQNKC VGCGDCKTAC 
NQANQLPEGK SRVLLEQQSG RVEGQPCPHC GKMSCDCERK FVRVSCQQCK NAPCVTVCPT
GAAHRDAKTG IVTMDASKCA GCKYCIGACP YNARYINSDT DVADNCDFCL NSKLAKGELP
ACVQSCKYDA LIFGDANDPQ SYVSKLLAVK DSVRIKPQFG TEPSLRYIPI VKLGV