Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3528 |
Symbol | |
ID | 4256920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4176853 |
End bp | 4177479 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124212 |
Product | flavoprotein oxygenase |
Protein accession | YP_739565 |
Protein GI | 114049015 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAG AACGCTATTT TTACGAGCCG AGCAAAGGAC ATGGACTATC GCACGATCCC TTAAATGGGA TTGTCGCCCC CAGACCCATA GGCTGGATCT CCTCGCGCAG TGCCCAGGGA CAACGCAATC TCGCACCCTA TAGTTTTTTC AATTGTTTCA ACTACAAACC ACCGATCATT GGTTTTGCCA GCACAGGCTG GAAGGACAGT GTCGCCAATA TCGTCGACAC CGGCGAATTC GTCTGGAACC TCACCACCCG CAGCCTTGCC GAGAAAATGA ATCAAACCTC CGCCATGTTG CCACGCGGTC AAGATGAGTT TGCCTTTGCT GGACTCACCC CAAAAGTGGG TACTATCGTC CAAGCTGAGC TGGTCGCCGA AAGCCCAGTT AACTTCGAGT GTAAGTTGTC GCAGTGCATC CAGCTTACTG CCGCCAATGG GGACAAGATT GATACTTGGC TCGTCTTAGG TGAAGTTGTT GCCGTGCATA TTGCTAAGCA TTTGCTCAAT AGTGAAGGTG TGTATCAAAC CGCCCTTGCC GAACCTGTGC TGCGCGCAGG CGGCCCATCG GCGTATTACG GCATCTCCGA AGATCTGCGT TTCGATCTAC ATAGACCACA AGTGTAA
|
Protein sequence | MTTERYFYEP SKGHGLSHDP LNGIVAPRPI GWISSRSAQG QRNLAPYSFF NCFNYKPPII GFASTGWKDS VANIVDTGEF VWNLTTRSLA EKMNQTSAML PRGQDEFAFA GLTPKVGTIV QAELVAESPV NFECKLSQCI QLTAANGDKI DTWLVLGEVV AVHIAKHLLN SEGVYQTALA EPVLRAGGPS AYYGISEDLR FDLHRPQV
|
| |