Gene Shewmr7_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3527 
Symbol 
ID4256919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4174751 
End bp4176418 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content34% 
IMG OID638124211 
Productprotein of unknown function DUF1524 RloF 
Protein accessionYP_739564 
Protein GI114049014 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGG AACCAAAAAA TGAAAACTTC AATGAGCTAA TTGGTGGCTC AAATAAGTAT 
CTAGTACCTA GATTCCAAAG AGACTACGCT TGGGATATCG AACAATGGGA AGACCTCTGG
AGTGATATAA ACTCACTAGA TGAAGAAGGT TTTCATTATA TGGGATATAT CGTTCTTCAA
CAAAAAGAAC AATATCAATT TGAAGTTATA GATGGCCAAC AGCGATTAGT AACTCTCTCC
CTAATTGTTT TAGCAGCAAT GAAAGCAATA AAAACAATGA TTTCAAAAGG TGAAGATGAG
CAGGAAAATA AAGAAAGACT TGATGAGATA ACTAAGAAAT TTGTTGGCAC GAAAAACTTT
GTCTCTTTAA AAGTCGTAAG TAAACTAGAA CTAAATAGAA ACAACAATAG ATTTTTCCAA
AAAATTTGTT CGACATTGGA AGCTCCAAAT AATAGAGGAA TGACATCCAC TAATAAACTA
ATCAGAAAAT GCTTTGACTT TTTCTCCCAA AAACACTTCG GGAATACCGG CTCTGAGATT
GCACAATTTA TAGCAGATCT TTCTTCATCA ATGGTATTTA CCAAGATAAT TGTTCAAGAT
GATTTAAATG CTTATAAAGT CTTTGAAACA TTGAATGCTC GAGGTGTACA ACTTTCTACC
CCTGATCTGT TAAAAAACTA TCTATTTTCT ATCGTAACCA AAGATGTTAA CTTTGATGAA
GAAGAACTAA ATGACTTAGA TGAGCAATGG TCAGAAATTA TAGCCCAGCT AGGTGAAAGC
AATGTGTCAG ATTTTGTTCG TTACCATCAT AATTCACACA GAAAAATGGT TACGAAGAAA
GAACTTTTCT CGTCAATGAG GAAGGCAGTT AACACTCCTG AAGAAGCATA TAGCTATCTA
AAGTCACTGA TTGAGCATGC TCCGGTTTAT GCCTCTCTAA TCAATCCTAG TGATGCATGG
TGGGCTGAGC AGCCACAAGA ATATCGAGAT GCTTTACAAT ATCTGGTAGG AATCAGACTA
TTTAATATTA AGCAACCATT AACAATATTG ATGCCTGCAT TTGAGAAACT TACTCCTATA
GAATTTGTTA AAACTGTTAA ATATTTATAT GTTTTATCAA TTCGTTATAA TGTAATTTGC
CATTTATCAC CGAGTGAGCA AGAGTCAATA TATAATCAAA TTGCAATGAA GGTCTCGAAT
GGAGAATATA GTCGAGCAAG TCATATAAAA AATGGTGATG AGTTCAAACG TATTTATCCT
GATGACAACA CTTTCTTTAA CGCATTTGAA TTCCATCGAA TGCCTAGCCG ACAAACAGCA
AAAAAAATAA GGTTTCTTCT TTCAGAAATT GAAAACCATC TTGGATTCCA TTGTGACTTC
AATAAAACAA CTCTTGAACA TATATGCCCA TACAACCCTG AAAAACAATG GATTGATTAC
TTTGGCGAGG GAGTCAATGA TGTAAAAGAT AGATTGGGGA ATATGCTTTT AATGGACAAG
GATGATCTTA AGAGAGCAGA CTTTGAGAGT AAGAAAATAG CATATTCTAG TTCAAGATAT
AAATTAGCTA ATAAAGTTGC TGAATTTAAA AACTGGGATC TAGATTCTGT TAACGAACAG
CAAAAATGGT TAGCTTCTCT TGCTGTACAA ACTTGGCGTG TAGATTAG
 
Protein sequence
MLMEPKNENF NELIGGSNKY LVPRFQRDYA WDIEQWEDLW SDINSLDEEG FHYMGYIVLQ 
QKEQYQFEVI DGQQRLVTLS LIVLAAMKAI KTMISKGEDE QENKERLDEI TKKFVGTKNF
VSLKVVSKLE LNRNNNRFFQ KICSTLEAPN NRGMTSTNKL IRKCFDFFSQ KHFGNTGSEI
AQFIADLSSS MVFTKIIVQD DLNAYKVFET LNARGVQLST PDLLKNYLFS IVTKDVNFDE
EELNDLDEQW SEIIAQLGES NVSDFVRYHH NSHRKMVTKK ELFSSMRKAV NTPEEAYSYL
KSLIEHAPVY ASLINPSDAW WAEQPQEYRD ALQYLVGIRL FNIKQPLTIL MPAFEKLTPI
EFVKTVKYLY VLSIRYNVIC HLSPSEQESI YNQIAMKVSN GEYSRASHIK NGDEFKRIYP
DDNTFFNAFE FHRMPSRQTA KKIRFLLSEI ENHLGFHCDF NKTTLEHICP YNPEKQWIDY
FGEGVNDVKD RLGNMLLMDK DDLKRADFES KKIAYSSSRY KLANKVAEFK NWDLDSVNEQ
QKWLASLAVQ TWRVD