Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3523 |
Symbol | |
ID | 4256269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4169659 |
End bp | 4170870 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638124207 |
Product | major facilitator transporter |
Protein accession | YP_739560 |
Protein GI | 114049010 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAGCAG TTCAACCCCA GACTCAGGCT CAAAGCAGCG CGCTTTGGGT GTTACTCGCC TTGGCATTAG GCACCTTTGC CCTAGGCACC ACAGAATTTG CCGCCATGAC CTTAGTGCCT TATATCGCCA GTGATTTAAG TGTTGATGTC GCCCATGTGA GTTATGCCAT CAGTGCCTAT GCCCTTGGGG TGGTGGTGGG CTCGCCCATC ATTATGGTGC TGGGGGTGAG GATTAAGCGG CGCACGCTGT TAATCGCCTT GGCCGCCATG ATGGCGGTTG CCAATGGTTT AAGCGCCCTA GCACCCAGCT TGAATTGGTT GGTCTTTTTC CGCTTTTTAA GTGGCTTGCC CCATGGGGCT TACTTTGGGG TGTCTATGTT ACTGGCGGCG TCCTTAGTGC CCCCCGATAT GAAGGCTCGA GCGGTTTCTC GGGTGATTAT CGGCTTAACC TTAGCCACTA TCGTTGGCGT GCCCTTCGCG ACTTGGATGG GACAAACCGT CGGTTGGCGC TCAGGTATCG GCATAGTGGC GATTATTGCC GCCGTGACTG CTGTGATGCT GTATTTTCTC GCGCCGAATG TCGCCGTACC GCAAAATGCC AGCCCGAAAA AAGAGCTGCA AACACTGAAG AACCGTGAAG TTTGGCTCAC GCTCGGCATT GCGGCTATCG GTTTTGGCGG GATTTTCTGT GTGTATACCT ATCTGGCCGA GACGCTGATC CAAGTCACCC AAGTCGAGCC CTTTAAAATC CCGGTGATGA TTGCGGTCTT TGGAATTGGC GCCACCTTGG GCACTTTAGT CTGTGGCTGG GCGGCGGATA AGTCGGCGCT GGCGGCGGCA TTTTGGTCGC TGGTGTTAAG CACCTTAGTG TTGGCGCTGT ATCCGAGTTT GACGGGATCT TATTGGGCAT TAATGCCGAT TGTATTCTTT GTGGGTTCGG GGATTGGTCT AGCAACCATA GTACAGGCGC GATTAATGGA TGTGGCCCCC GATGGGCAAG CCATGACGGG CGCCTTAGTA CAATGTGCCT TTAACCTTGC CAATGCGATT GGCCCATGGG TTGGCAGCTT AGTGATCTTA TCAGGCCAAG GCATCGCCGC GACTGGCTAT GCCGCAGCGC TGTTATCCCT CGGTGGTTTA GTCATGTGGT GGTTAACCCA TAGGGAGAGT CGCCGCGCTG ATAATCTTTG TACTGCAAAC TGCATTGATT AA
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Protein sequence | MQAVQPQTQA QSSALWVLLA LALGTFALGT TEFAAMTLVP YIASDLSVDV AHVSYAISAY ALGVVVGSPI IMVLGVRIKR RTLLIALAAM MAVANGLSAL APSLNWLVFF RFLSGLPHGA YFGVSMLLAA SLVPPDMKAR AVSRVIIGLT LATIVGVPFA TWMGQTVGWR SGIGIVAIIA AVTAVMLYFL APNVAVPQNA SPKKELQTLK NREVWLTLGI AAIGFGGIFC VYTYLAETLI QVTQVEPFKI PVMIAVFGIG ATLGTLVCGW AADKSALAAA FWSLVLSTLV LALYPSLTGS YWALMPIVFF VGSGIGLATI VQARLMDVAP DGQAMTGALV QCAFNLANAI GPWVGSLVIL SGQGIAATGY AAALLSLGGL VMWWLTHRES RRADNLCTAN CID
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