Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3504 |
Symbol | |
ID | 4258223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4150179 |
End bp | 4151900 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638124188 |
Product | hypothetical protein |
Protein accession | YP_739541 |
Protein GI | 114048991 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA AACTATTGTT TCGTACCCTT CTACTCTGGG CTTGTACATT GATGGCATAT GGTGTTCAGG CTACGGTAGA TAAGGTCGAA CTGGATGGTA ACATTGTTAA GCAGACTACA CTCGATGATT GGCAAACGAT TAACCTCGGG AGCAGTACTG CAAATGTCAC CACAGGAGTG ATTTCTGACT TGCCACCACA AACGATTTTT TGGAAAGGTG GCTCGAAAGA CACTTCAGAC GTGACTGAAT GGTGGTACAA GGACGGTGCC GTACCTGATA AAGATGACCT ACGCAATGGC TATGCGGCGG CCTATTTTAT CAATAACGGC GGTGGTAGTG ACGATTTAGT GTTTTACTTT GGTGCCGAGC GTTATGCCAA CAATGGTGAC GCAATTATGG GATTCTGGTT TTTCCAAGAT AAAGTTGGTC CCGGCTCTGG TAATAGATTT ACCGGTCAAC ACCAAGAAAA CGACTTATTT ATCATCATGG AATATCCTCA GGATTCAAAT TCCGTACCCT TTGTGCAAGT GATGCGTTGG GTGAATTCTG GTGGTAATGT CTCTGAACAT TTAGAGTTGC TCTATGCTTC TGGGGAAGCG GGAGCTAAAT GTTTATCAGG CGGTGACACT GGGGTTGCCT GCGCCATTAC CAATGAAAAT CCTGAACTTG CTGGGGTGGC AAATGGTTTG TGGCCCTATG AAAACAAAGA AGGAATTCCT AACACTTATC CCTATGAGTC CTTCTTCGAA GGACGTTTGA ATGTGACCCA AGCATTCTTG GCTGCGGGCG TGAGTGAAAT TCCTTGTTTC AGTAGTTTCC TCATAGAAAC CCGCTCGTCT CGTTCCGAAT CGGCCCAATT GAAGGACTTT TTAGGCGGCG ATTTCCCTCT CTGTAGTATT GCGATTGCGA AAACCTGTAG TGCGACTGAG CTGACTGGCA GTAATCAATT CCGTATCGAT TACACCTTGC AACTCACTAA TACCGGGGTT GGTAGCATTG GTGCCGGTGA AACTGTCACC ATCAACGACA CGCCAAGCAA TGGTTCTGCC TTTAGCATAA ACCAAGCCTT GAGTGCATTT GCTAACGGTG CTGACGGTTG GGCGCCTAAC GAAATGTTAA CCTATACAGG TTATTACATT TCAGAGGTGA ATGGCGGTAC TAACACCGTC GATGCCAGTG TGAGTTTTGG CTCTGCCAGT ATCAGCGCCG ATCCGTACAC TGCAACCTGC GATTCGTTGG CGTTGAGTCC CATGTTAACT ATTGCGAAAA ACTGCAGCGT ATCACTGGAG GAAAATAGTG GCTTAGTTGC CCTACGAAAA GACTACGACA TTACCGTCTG TAACACTGGC GATGCACCTT TAGATGTTTC ACTGACAGAC TCAGTGGACA CTAGCCTAAA TGCATCATTC AGTTTGGATT TTGCGAAGCA GTGCCTAACC AACAGCGATT GCGGATCTGG GTATAGTTGC GACAATAATA GTCTCATGTG TACCAATACG GCGGGCGAAT TGGAGGGTAA CTTTGGCGGC AATGTTTGTC AGCTAACCCA AAGTTATTAC TTCCCAAGCA CATTACCAAC AGGTGCCGAC GGTACTCTGT CTAATACCGC GACTGCGAGA GCGACTTCCC CTGTGGTTGA TACGGGTGAT TTGGCGACGA TCGGTAACTC CGACACTGCG AGTTGCGACT TGTGTCCATT ACCATTGCCT GCGCAGGAAT AG
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Protein sequence | MKLKLLFRTL LLWACTLMAY GVQATVDKVE LDGNIVKQTT LDDWQTINLG SSTANVTTGV ISDLPPQTIF WKGGSKDTSD VTEWWYKDGA VPDKDDLRNG YAAAYFINNG GGSDDLVFYF GAERYANNGD AIMGFWFFQD KVGPGSGNRF TGQHQENDLF IIMEYPQDSN SVPFVQVMRW VNSGGNVSEH LELLYASGEA GAKCLSGGDT GVACAITNEN PELAGVANGL WPYENKEGIP NTYPYESFFE GRLNVTQAFL AAGVSEIPCF SSFLIETRSS RSESAQLKDF LGGDFPLCSI AIAKTCSATE LTGSNQFRID YTLQLTNTGV GSIGAGETVT INDTPSNGSA FSINQALSAF ANGADGWAPN EMLTYTGYYI SEVNGGTNTV DASVSFGSAS ISADPYTATC DSLALSPMLT IAKNCSVSLE ENSGLVALRK DYDITVCNTG DAPLDVSLTD SVDTSLNASF SLDFAKQCLT NSDCGSGYSC DNNSLMCTNT AGELEGNFGG NVCQLTQSYY FPSTLPTGAD GTLSNTATAR ATSPVVDTGD LATIGNSDTA SCDLCPLPLP AQE
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