Gene Shewmr7_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3504 
Symbol 
ID4258223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4150179 
End bp4151900 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content47% 
IMG OID638124188 
Producthypothetical protein 
Protein accessionYP_739541 
Protein GI114048991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA AACTATTGTT TCGTACCCTT CTACTCTGGG CTTGTACATT GATGGCATAT 
GGTGTTCAGG CTACGGTAGA TAAGGTCGAA CTGGATGGTA ACATTGTTAA GCAGACTACA
CTCGATGATT GGCAAACGAT TAACCTCGGG AGCAGTACTG CAAATGTCAC CACAGGAGTG
ATTTCTGACT TGCCACCACA AACGATTTTT TGGAAAGGTG GCTCGAAAGA CACTTCAGAC
GTGACTGAAT GGTGGTACAA GGACGGTGCC GTACCTGATA AAGATGACCT ACGCAATGGC
TATGCGGCGG CCTATTTTAT CAATAACGGC GGTGGTAGTG ACGATTTAGT GTTTTACTTT
GGTGCCGAGC GTTATGCCAA CAATGGTGAC GCAATTATGG GATTCTGGTT TTTCCAAGAT
AAAGTTGGTC CCGGCTCTGG TAATAGATTT ACCGGTCAAC ACCAAGAAAA CGACTTATTT
ATCATCATGG AATATCCTCA GGATTCAAAT TCCGTACCCT TTGTGCAAGT GATGCGTTGG
GTGAATTCTG GTGGTAATGT CTCTGAACAT TTAGAGTTGC TCTATGCTTC TGGGGAAGCG
GGAGCTAAAT GTTTATCAGG CGGTGACACT GGGGTTGCCT GCGCCATTAC CAATGAAAAT
CCTGAACTTG CTGGGGTGGC AAATGGTTTG TGGCCCTATG AAAACAAAGA AGGAATTCCT
AACACTTATC CCTATGAGTC CTTCTTCGAA GGACGTTTGA ATGTGACCCA AGCATTCTTG
GCTGCGGGCG TGAGTGAAAT TCCTTGTTTC AGTAGTTTCC TCATAGAAAC CCGCTCGTCT
CGTTCCGAAT CGGCCCAATT GAAGGACTTT TTAGGCGGCG ATTTCCCTCT CTGTAGTATT
GCGATTGCGA AAACCTGTAG TGCGACTGAG CTGACTGGCA GTAATCAATT CCGTATCGAT
TACACCTTGC AACTCACTAA TACCGGGGTT GGTAGCATTG GTGCCGGTGA AACTGTCACC
ATCAACGACA CGCCAAGCAA TGGTTCTGCC TTTAGCATAA ACCAAGCCTT GAGTGCATTT
GCTAACGGTG CTGACGGTTG GGCGCCTAAC GAAATGTTAA CCTATACAGG TTATTACATT
TCAGAGGTGA ATGGCGGTAC TAACACCGTC GATGCCAGTG TGAGTTTTGG CTCTGCCAGT
ATCAGCGCCG ATCCGTACAC TGCAACCTGC GATTCGTTGG CGTTGAGTCC CATGTTAACT
ATTGCGAAAA ACTGCAGCGT ATCACTGGAG GAAAATAGTG GCTTAGTTGC CCTACGAAAA
GACTACGACA TTACCGTCTG TAACACTGGC GATGCACCTT TAGATGTTTC ACTGACAGAC
TCAGTGGACA CTAGCCTAAA TGCATCATTC AGTTTGGATT TTGCGAAGCA GTGCCTAACC
AACAGCGATT GCGGATCTGG GTATAGTTGC GACAATAATA GTCTCATGTG TACCAATACG
GCGGGCGAAT TGGAGGGTAA CTTTGGCGGC AATGTTTGTC AGCTAACCCA AAGTTATTAC
TTCCCAAGCA CATTACCAAC AGGTGCCGAC GGTACTCTGT CTAATACCGC GACTGCGAGA
GCGACTTCCC CTGTGGTTGA TACGGGTGAT TTGGCGACGA TCGGTAACTC CGACACTGCG
AGTTGCGACT TGTGTCCATT ACCATTGCCT GCGCAGGAAT AG
 
Protein sequence
MKLKLLFRTL LLWACTLMAY GVQATVDKVE LDGNIVKQTT LDDWQTINLG SSTANVTTGV 
ISDLPPQTIF WKGGSKDTSD VTEWWYKDGA VPDKDDLRNG YAAAYFINNG GGSDDLVFYF
GAERYANNGD AIMGFWFFQD KVGPGSGNRF TGQHQENDLF IIMEYPQDSN SVPFVQVMRW
VNSGGNVSEH LELLYASGEA GAKCLSGGDT GVACAITNEN PELAGVANGL WPYENKEGIP
NTYPYESFFE GRLNVTQAFL AAGVSEIPCF SSFLIETRSS RSESAQLKDF LGGDFPLCSI
AIAKTCSATE LTGSNQFRID YTLQLTNTGV GSIGAGETVT INDTPSNGSA FSINQALSAF
ANGADGWAPN EMLTYTGYYI SEVNGGTNTV DASVSFGSAS ISADPYTATC DSLALSPMLT
IAKNCSVSLE ENSGLVALRK DYDITVCNTG DAPLDVSLTD SVDTSLNASF SLDFAKQCLT
NSDCGSGYSC DNNSLMCTNT AGELEGNFGG NVCQLTQSYY FPSTLPTGAD GTLSNTATAR
ATSPVVDTGD LATIGNSDTA SCDLCPLPLP AQE