| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3503 |
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| Symbol | |
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| ID | 4258222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4148158 |
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| End bp | 4150119 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638124187 |
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| Product | hypothetical protein |
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| Protein accession | YP_739540 |
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| Protein GI | 114048990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT CTGCCATGAT GTTAAGCAGC TTACTGCTAA CCAACACAGT CCTTGCTGCA
GATATGCGCC CTTTTGAAGG CACGCTTTCC CTCGAGGTGG AAGATTTCCC ACAACATGCG
ATTGAAACGT TTCGTCTCCA CGGTAAACAA AACCAAGTGC ACGACTTAGC CTTAACATCG
ATCCCCCATT GGCTAAAGCC CGGTCAGAGT ATCCGTGTTT TTGGTCAGGC CAATGGCAAG
CAATTGCAGG TGAGCGATAG TAACCTCAGT TTACTGCAGA CCAATGAAAC GTCAGGATCA
GCCCAAACCG TCAACTCGGC CATCACACCT ATCAGTGGCA ACAGAAGCGT TTTAGTGGCT
GAAGTAAACT TTGCGATCAA TCCTGTCGTC AGGCTGACTG AAGCAGAGAT CCAAGATCTG
CTATTTAATC AAGCTTCAGC TTTCTACGAA GAAAACTCCT ATGGTTCTGT CACTCTGTCA
GGTGACACGA CCAGCCCAAT CACAGTCAAC GTGGATGTCT CTGTCTGTAA TACTGATGCC
GTTGCCTTAG CCGCAGATCA AGAGCTTAGT GCCCGTGGCT TTAACCCAGA TAATTACGAC
CATGTGATGT ACTTGATCCC AACTCATCCT AAGTGCACCT GGTCAGGCAA AGCCAATGTG
GCAGGCAAAC GTAGCTGGAT TAAGCGAGTA CAGTTATCCA CCATAAACCA TGAATTGGGG
CATAATCTAG GCTTATTCCA TGCCAATAAG AAAGATTGTG GCGCGGTCAC GACAGCTGAC
AGCAGCCAAT GTACCATCAC CGAATATGGC GACTATCTCA GTGCAATGAG TGGCACCAAT
ACTCCCAAGC ATTTCAATGC ATTCCATAAG GAGCAATTAG GTTGGCTTAG TGGCGATCGC
ATCAAGACCG TGAGTACTGA TTCACGTGTA ACCCTATCTC CAGTGGAGGC CGAAGGTAAC
TTCCCATTAT TATTGAAAAT TCCAAATGGT CAGGACACTT CAGGTAACGA GCTGTTCTAC
TATGTCGAAT ATCGTCAGGC AACTGGGTTC GATAGCTCAC TAGCGACTGA AGCAGCCGAT
ATGCTCGATG GCGTAAGATT GCGCGAAGGC GCCAGCAACA ACGCTGCCAG TAGCTATTTG
CTTGATCCAA CACCAAACAG CAGTAGTTAT GATTGGGATG ATATCAGTTT GGCGCCGGGA
CAATCCTTTG AGCAACAAGG TGTGCGTATC GACGTCATCT CTTCCGATAC CGCCTCAGTC
ACCTTAGATG TTGTAATGCA AAATACGGTA ACACAGTGTA TTCGTGGTAA TAGCAGCTTA
GCGGTACAAT CGGCTGTCTC ACAATTGCAA CAAGGGCAGC AAGGTTCGGT TGATTTACTG
CTCACCAACA ACGACAGTAG CGCCTGCCCA GATACTTACT ACAGCCTGAC AACTCAAGCC
GATGCAGGCT TATATGCAAG CTTAGCGAAT AACAGTGTGA CACTAGCCCC ACAAACCAGC
ATGCACCTGA CCCTATCGCT AGAAGCGTTG CAAGGCAGTG GTAGCAATAC TTGGAAAGTG
ATCAGCAACA ATCAGACAAG CTCACAGCAA GTGATTAGCT CTGGTAGCGT ATTGCTAACC
GCTGCGACGG CTAACACCGC ACCATTGGCC GTGAGTGATG ATTTTAATGA TATTAGCACC
AGCACTGTGC TCAATGTCCT AGCCAATGAC AGTGATCTAG ATGGTGACAG CCTGTTTATC
AGTGGCACAA CCCAAGGGAT ATACGGAAAA GTCACAGTCA ACACCAACAA TACGCTGACC
TATGTGCCAT CTAAACGTTT TAAAGGCAAC GATAGCTTTA GCTACACAGT GAGTGATGGC
AAATTAACTG CTATCGCCAC AGTCGCAATC AGCCCAAGCA CGACAAGCAG TGGTTCATCT
GATACCAGCA CCGGCACGGG TGGCAAAGGA AAAAATAAAT AA
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| Protein sequence | MKYSAMMLSS LLLTNTVLAA DMRPFEGTLS LEVEDFPQHA IETFRLHGKQ NQVHDLALTS
IPHWLKPGQS IRVFGQANGK QLQVSDSNLS LLQTNETSGS AQTVNSAITP ISGNRSVLVA
EVNFAINPVV RLTEAEIQDL LFNQASAFYE ENSYGSVTLS GDTTSPITVN VDVSVCNTDA
VALAADQELS ARGFNPDNYD HVMYLIPTHP KCTWSGKANV AGKRSWIKRV QLSTINHELG
HNLGLFHANK KDCGAVTTAD SSQCTITEYG DYLSAMSGTN TPKHFNAFHK EQLGWLSGDR
IKTVSTDSRV TLSPVEAEGN FPLLLKIPNG QDTSGNELFY YVEYRQATGF DSSLATEAAD
MLDGVRLREG ASNNAASSYL LDPTPNSSSY DWDDISLAPG QSFEQQGVRI DVISSDTASV
TLDVVMQNTV TQCIRGNSSL AVQSAVSQLQ QGQQGSVDLL LTNNDSSACP DTYYSLTTQA
DAGLYASLAN NSVTLAPQTS MHLTLSLEAL QGSGSNTWKV ISNNQTSSQQ VISSGSVLLT
AATANTAPLA VSDDFNDIST STVLNVLAND SDLDGDSLFI SGTTQGIYGK VTVNTNNTLT
YVPSKRFKGN DSFSYTVSDG KLTAIATVAI SPSTTSSGSS DTSTGTGGKG KNK
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