| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3495 |
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| Symbol | |
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| ID | 4258215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4139881 |
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| End bp | 4140894 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124180 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_739533 |
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| Protein GI | 114048983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA AAATTGGCAT TAATGGTTTC GGGCGTATGG GGCGTTTAGC CCTGCGTGCG
GCGTGGGAAT GGGATGATGT TGAGTTTGTG CAGATCAACG ATCCGGCGGG GGATGCGGCC
ACCTTAGCCC ATTTGCTTGA GTTCGATTCA GTCCATGGTC GCTGGCGTTA TCCGGTAACG
GCGAATGTCG ATGCGATCCT GATCCAAGAT AAAGCCATTC GCACCACGCG CAATAAAGCC
ATCGCCAATA CCGATTGGTC GGGATGCGAT GTGGTGATTG AAGCCTCCGG CGTGATGAAA
ACCAAAGCCT TGCTACAAGC CTATTTAGAT CAAGGCGTTA AGCGGGTGGT TGTGACCGCA
CCCGTGAAAG AAGAGGGTGT GTTAAATGTG GTGATGGGCG TGAACCATCA GCTATACGAT
CCTACTATCC ACCCAATCGT CACTGCCGCA TCTTGTACTA CCAACTGCCT TGCGCCTGTG
GTGAAAGTGA TCCATGAGCA GATCGGCATT AGGCATGGTT CCATGACGAC CATCCACGAT
ATTACCAATA CCCAGACGAT TCTCGATGCG CCCCATAAAG ATTTACGCCG TGCCCGCGCC
TGTGGGTTAA GTTTAATCCC TACTACCACC GGCAGTGCGA CGGCAATTAC CCATATTTTC
CCAGAGCTTA AGGGCAAGTT GAATGGCCAT GCCGTACGGG TGCCGCTCGC TAATGCGTCC
CTTGCCGACT GTGTATTTGA GCTTGAGCGC AGAGTGACTG AAGCAGAAGT GAATGCGTTG
CTACAAAGCG CCGCCGAAGG TGAATTGAAG GGCATTTTAG GTTATGAGGA GCGGCCGTTA
GTGTCGGTTG ATTATAAAAC CGATTCCCGT TCGAGCATTG TCGATGCGCT CTCGACCATG
GTGGTGAATG GCACTCAGCT AAAACTCTAT GTGTGGTACG ACAATGAGTG GGGATATGCC
AACCGTACGG CAGAGCTCGC CCGTTTAGTC GGCCAGCTTG ATATGCCGCG TTAG
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| Protein sequence | MAIKIGINGF GRMGRLALRA AWEWDDVEFV QINDPAGDAA TLAHLLEFDS VHGRWRYPVT
ANVDAILIQD KAIRTTRNKA IANTDWSGCD VVIEASGVMK TKALLQAYLD QGVKRVVVTA
PVKEEGVLNV VMGVNHQLYD PTIHPIVTAA SCTTNCLAPV VKVIHEQIGI RHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS
LADCVFELER RVTEAEVNAL LQSAAEGELK GILGYEERPL VSVDYKTDSR SSIVDALSTM
VVNGTQLKLY VWYDNEWGYA NRTAELARLV GQLDMPR
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