Gene Shewmr7_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3490 
Symbol 
ID4258210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4134238 
End bp4135593 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content50% 
IMG OID638124175 
Producthypothetical protein 
Protein accessionYP_739528 
Protein GI114048978 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT CGTTAGCCCA ATATCAAGAA GATTTACGCC GCCTTTCCGA TGAGCTTATC 
CGCATCCAAA CGCCGATTAA AATTTTGGAT GCCATCAAAT GGCCACGGGA AATGGAAGAG
CGTTTTCTCT CCAGTAAAGG CACGGTTCTG CCCGCGATTA CACAGGATTT TTATCAAAAA
ATTGCCCTGC CCTTCGATCC CATTAAAACC CAGGCCGAAT TGCTTGGGCT TAAACAAGAA
ATCCACCGCC GCTTAGGAAA AAAAGACAAG CTGGGCAAGA TATTAGTCGC TAACGTCGAC
CAGTATCGTC TGGTGGTCGA TATGTTGGGC CATAGAGGTA CGCCCGTCTT TGGTCAGCTC
AGCCAAGAAC TCTACGGCAG CGCCAGCCAC AGATTACATG GCGACCGCCA CACCCTGCGC
CAATTGGGCG ATAAGCTCAG CTATATTTTC TCCCTGCCCG CTGCGCGGCA TATGAATAAA
CATCATCCCA AAATCATCTC CGCCCCTGAG GCCGTGCATG TACTCAGCCA GAGATTGGAA
AAGTACTTTC ACAGTGATGA TATGCGGGTA CGGTTAAGTG ACGGCATTGT GTCCGATGCC
GCTGTGGGGG GCGATACCGT CAAACTCAAC AGTAAGGCCA TGTTCAGCGA GTCTGATCTT
AATGTGTACG AAGTCCATGA AGGTTGGGTA CATGTGGGCA CTACGTTAAA TGGTCGTGCG
CAGCCCCATG CGACTTGGCT CAGTGTTGGC TCTCCCCGCG TTGCAGCAAC CCAAGAAGGG
CTCGCAGTGT TACTCGAAAT GCTCACCCTG AGCTCAAATC CAGGCCGCGC CCGCCGTATT
AGCGATCGCG TCGCTGCGGT AGATATGGCG GAAAATGGGG CCGACTTTAT CGAGGTATTC
AATTATTTCA GAGAGTTAAA TCTAAGCGCT AAGGATAGTT ATCGGGTCAC ACAGAGGGTG
TTTCGCGGTG GAATGGTCGA AGGTGGTAGC TTCTTTACTA AAGATATCTC CTATGTTCGT
GGTTATGTTG AGAATATCAA CTTTATCCGT AGCGCCATTA CATCGGGTTT ACCCGAGCTG
ATCCCCATGC TGTTTTTAGG CAAACTCGCC ATTGAGGATA TTCCCGTTCT CTATCAAGCC
TGCCAAGAAG GCATACTCTC GCAGCCAAAG TATTTGCCGC CGATGTTCGA CAACTTTAGC
GGTCTTTATG CCTGGTTTGG CTTCGCCTCA GGATTAGCAG GTATCGATTT GAAAGGGGTG
CAACGTCACT TCACCCGCTT ATTTAAAGAT GTGCCCAGTA TCGACCCAAG CCTCGAGTTA
TTCGACGATA CTGAGTTTGA CAACAACTCA GATTAA
 
Protein sequence
MSESLAQYQE DLRRLSDELI RIQTPIKILD AIKWPREMEE RFLSSKGTVL PAITQDFYQK 
IALPFDPIKT QAELLGLKQE IHRRLGKKDK LGKILVANVD QYRLVVDMLG HRGTPVFGQL
SQELYGSASH RLHGDRHTLR QLGDKLSYIF SLPAARHMNK HHPKIISAPE AVHVLSQRLE
KYFHSDDMRV RLSDGIVSDA AVGGDTVKLN SKAMFSESDL NVYEVHEGWV HVGTTLNGRA
QPHATWLSVG SPRVAATQEG LAVLLEMLTL SSNPGRARRI SDRVAAVDMA ENGADFIEVF
NYFRELNLSA KDSYRVTQRV FRGGMVEGGS FFTKDISYVR GYVENINFIR SAITSGLPEL
IPMLFLGKLA IEDIPVLYQA CQEGILSQPK YLPPMFDNFS GLYAWFGFAS GLAGIDLKGV
QRHFTRLFKD VPSIDPSLEL FDDTEFDNNS D