Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3476 |
Symbol | |
ID | 4255430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4122107 |
End bp | 4122631 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638124161 |
Product | hypothetical protein |
Protein accession | YP_739514 |
Protein GI | 114048964 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTC AGTTCTTATT ACTCGCCAGC GTGTTGAGTT GCAGTGCTGT ATGGGCCGCA GATGAGGCGA AAACCGACCC AATGACTGAA GATGGGGTGG TTAAAATTGT TTGGCAAAAC CCAAAGGATT TTCGTGATAT TAAATCATCG GGCGAAATTC AGTCCCGTTA TGAAAAACGT CTATTCGATA CCTTAACTAC CAATATCAAT AAAGAAGCGG CAAAAGTCTT AAAGCCGAAT CAAAAGTTAG AAATGACGGT GACCGATGTC GATTTAGCCG GTGATATGCG CCCAACCTTT GGTGCAACTG CGGATGATTT AAGGGTGGTT AAAGAGATTT ACCCACCGCG CATGACCTTT AGTTATCAAG TGCTTGAAAA TGACAAAGTG ATCATCGCCG GTGATGAAAA ACTCTCGGAC ATGGGCTTTA TGACGGGCAT TCAACCTATC ACTGACAAGC CATTTATGTA TGAAACTGAG ATGCTTCGTG ATTGGTTAAA GAAGACCATT GCGCCTAAAC TCTAG
|
Protein sequence | MKVQFLLLAS VLSCSAVWAA DEAKTDPMTE DGVVKIVWQN PKDFRDIKSS GEIQSRYEKR LFDTLTTNIN KEAAKVLKPN QKLEMTVTDV DLAGDMRPTF GATADDLRVV KEIYPPRMTF SYQVLENDKV IIAGDEKLSD MGFMTGIQPI TDKPFMYETE MLRDWLKKTI APKL
|
| |