| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3473 |
|---|
| Symbol | |
|---|
| ID | 4255427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4118941 |
|---|
| End bp | 4119837 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124158 |
|---|
| Product | GumN family protein |
|---|
| Protein accession | YP_739511 |
|---|
| Protein GI | 114048961 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAA GTCGGTGGCG ACTATTACTG GCGCTGTGCG GCGTCGCAAT GTTTACCAGT
GGACCGAGTT GGGCGGCACA GACGGATAAA CCGCCGTTTT ATCAGGTGCA ATGGCAGGGA
AAATCCGCTT ACCTTTTGGG TTCAATCCAT ATTGGTCGTG CCGATTTTTA TCCTATGCCG
GCGCAAGTGG AGGCGGCATT TACCAAGTCC AAGGGATTGG TGGTTGAAAT CGATACTAAT
AAAATCGACA GCCGCGCCCT ATTGCAAAAG TATGGTATGG CGACTCACGC ACAGGGGCTC
GATTGGCAGA GCCGAGATAA GCAAACGATA GAGGTGATGC GCAACTATTG TGAAGACAAA
GCAAGCCTAT GTCAGTCGAT TCAAGCCTTT GCGCCTTGGT TGCAGGCATC GCAACTTAAT
CTATTACGCT ACAATAGCTT AGGATTTAGT ACCGACTATG GTGTCGATAT GCAGTTGCTT
GGCCGCGCGG GTAAGCCTGT GTATCAGCTA GAGACGGCGG AGTCGCAGTT TCAGTTGCTA
TCCTCCTTCG ATAGCCAAAT CCAGTGGTCT ATGGTGCGCG AAGCCATTAA TGCCTCAGAT
GCCGAGCTAC TCTCACTGGT TGAGGCGTGG CGCTCCGGTG ATGAAACTGC GCTGGATACC
TTAATGCAGG AGCAGCTCGG CGGTGAGGGC GACACTCTGA TACTGGATAA AATTCTTTGG
CAGCGCAATA AGGTCATGGC CGATGGCATG ATGAGATTAA TGACCGCAGA AGCCGCCAGC
GAACCGCTAT TTGTGGTGGT GGGCGCAGGC CATGTGGTGG GTGATAAAAG CGTAGTTCAG
CTACTTAAAC AGAAGGGCGC CACCGTAATC GCCTGTTGGC GTGAGCAATG TGACTGA
|
|---|
| Protein sequence | MATSRWRLLL ALCGVAMFTS GPSWAAQTDK PPFYQVQWQG KSAYLLGSIH IGRADFYPMP
AQVEAAFTKS KGLVVEIDTN KIDSRALLQK YGMATHAQGL DWQSRDKQTI EVMRNYCEDK
ASLCQSIQAF APWLQASQLN LLRYNSLGFS TDYGVDMQLL GRAGKPVYQL ETAESQFQLL
SSFDSQIQWS MVREAINASD AELLSLVEAW RSGDETALDT LMQEQLGGEG DTLILDKILW
QRNKVMADGM MRLMTAEAAS EPLFVVVGAG HVVGDKSVVQ LLKQKGATVI ACWREQCD
|
|---|
| |