| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3458 |
|---|
| Symbol | |
|---|
| ID | 4257654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4104485 |
|---|
| End bp | 4105480 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638124143 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_739496 |
|---|
| Protein GI | 114048946 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCT CTGTACTCAT CTGTGACGAC TCCGCCATGG CGCGCAAACA AATGGCTCGC
ACCCTACCGA AAGAATGGGA TGTCGAGATC ACCTACGCTA CCAATGGCGC CGAAGGTTTA
GATGCCATTC GCGCAGGTAA AGGCGAAGTT GTCTTCCTCG ACCTTAATAT GCCAGTCATG
GATGGTTATG AAGTGCTGCA AACCGTGCAG CAAAACGATC TTCCCGCGCT GATTATTGTG
GTCTCGGGTG ATATTCAGAT CAAAGCCCAT GAAAGAGTGA AAGCCTTAGG GGCATTGGAT
TTTATTCAAA AGCCCGTCAG TGCCGACGCC ATCAGTAATA TCCTGCAGGA ATACGGCATC
CTCACCTTAA CGCAGAAAGA TCAGGCGGAA GAAACGCCGA TGATCAAAGT CGATATGCGT
GACGCCTGCC AAGAGATCGC CAACGTCGCC ATGGGGCGCG CCGCCGATCT GTTAGCCAAA
CTTCTCGATG TTTTTGTCCT CTTACCTATT CCAAACGTGA ACGTGCTCGA AGTCAGTGAG
CTGACGATGG CGCTCAAAGC GACGGAAGAA AGCTCCACGG TATCAGCCCT CTGCCAAGGA
TTTATTGGTG CGGGCGTGGC GGGTGAAGCC CTGCTGCTAT TCCACGATTC GAGTTTTCAA
GACATGGCAA AACTCATGGG GCTAGCCAAT CCAGAGGACA TTAGCACCGA GATTGAAGTG
TTGATTGACA CAGGCAACGT ATTGATTGGC GCCTTCCTAA ACGGGATCTC AGAGCAGCTC
GACATGAAGT TCAGCCAGGC TCACCCTGTA GTGCTAGGCC GCCACTGTAC GGTGAATGAT
CTTATCCATG ATAACTCGGA AAAATGGCAC AGAACCTTAG CAATGGAGAT TAACTATCGT
ATTGAAAACC ATAATGTTCA ATGCGATTTG TTACTGTTAT TTACCGAAGA CTCTATTCCG
ACGCTCAGTT ATAAGCTCGG TTATTTACTC GATTAA
|
|---|
| Protein sequence | MTISVLICDD SAMARKQMAR TLPKEWDVEI TYATNGAEGL DAIRAGKGEV VFLDLNMPVM
DGYEVLQTVQ QNDLPALIIV VSGDIQIKAH ERVKALGALD FIQKPVSADA ISNILQEYGI
LTLTQKDQAE ETPMIKVDMR DACQEIANVA MGRAADLLAK LLDVFVLLPI PNVNVLEVSE
LTMALKATEE SSTVSALCQG FIGAGVAGEA LLLFHDSSFQ DMAKLMGLAN PEDISTEIEV
LIDTGNVLIG AFLNGISEQL DMKFSQAHPV VLGRHCTVND LIHDNSEKWH RTLAMEINYR
IENHNVQCDL LLLFTEDSIP TLSYKLGYLL D
|
|---|
| |