| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3455 |
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| Symbol | |
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| ID | 4257651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4098877 |
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| End bp | 4101783 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124140 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_739493 |
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| Protein GI | 114048943 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTG CCTTAGGACA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACAGTCGTAC AAGTTGAAGG CCGTATGGTC ACAGTGTTAT TCCCTGCGAC TGGTGAGAAC
CGTATGTTCT CGCGCAACGA AGCCCCCCTG ACCCGTGTCA TATACAACCC TGGCGATACG
GTTGAAAGCC ATGAAGGCTG GAGCCTCTCG GTTGAAGAAC TCACCGAAAA AGACGGCCTC
GTCGTCTACC ACGGAATCCA CAGCGAAACA GGTGAAAAAG CCAGCCTGCG TGAGACCCTG
TTAAACCACA ACATTCGCTT TAACAAACCG CAGGATCGCC TGTTTGCCGG TCAGATTGAT
CGCCTCGACC GTTTCGGTAT TCGTTATCAA TGCCAGTTAC TGCGTCATCA ACTGGCGACC
TCAGATTTAC TCGGCTTACA AGGTCCACGC GTCGGCCTTA TCCCCCACCA GATGTGGATT
GCCCATGAAG TGGGTCGCCG TTATGCGCCG CGTGTATTGT TGGCTGACGA AGTGGGTTTA
GGTAAAACCA TCGAAGCGGG TCTGATTATC CACCAACAAC TGCTCACTGG CCGCGCCGAG
CGGGTACTGA TTATTGTGCC GGATACCCTG CGCCATCAGT GGTTAGTAGA GATGCTACGC
CGCTTTAACC TGCGATTCTC AGTATTTGAT GAAGACCGTT GTGTCGAAGC CTTTGCCGAC
CATGACAATC CTTTCTACAC CGAGCAGTTA GTGATTTGTT CCCTCGAATT ACTGCGTAAA
AAGAAACGTC TCGACCAAGC ACTCGATGCC GACTGGGATT TGCTGGTCGT CGACGAGGCT
CACCACTTAG AGTGGACCGA AGAAGCCCCG AGCCGTGCCT ACCAAGTGGT TGAAGCATTG
AGCGAAGTAG TGCCTGGTGT ATTGTTATTA ACGGCAACGC CGGATCAACT CGGCCATGAG
AGCCACTTTG CGCGCCTGCG CCTACTCGAC CCGGATCGTT TCTACGACTA CGATGCCTTC
CTCGCCGAAG AAAACAGCTA CAAAGATGTC GCCGTTGCCG CCGAAGCCTT AGCGGGCGAC
GCAAAATTAT CCGATGCCGC CATCAACAGC CTCACCGAAT TACTCAGCGA GAAAGACATA
GCGCCGAGCA TTCGTTTAAT TCAGGCCGAA GATATTGATA GCGAACTGCA ACAAGCGGCC
CGCAGCGAAC TGCTGCAAGA GTTGCTCGAC CGCCACGGTA CAGGTCGCGT GCTGTATCGC
AACAGCCGCG CCTCGGTAAA AGGTTTCCCG AAACGTATTT TCAACGCCTA TCCCCATGCA
ATGCCTGAGC AGTATCTTAC CGCTGCCCGC GTAAATGAGA TGATGGGTGG TCGTAAGACC
TTAGAAGCGA AAGCGGCACA AGCCCTAAGC CCTGAAAAAC TCTACCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA GTTCGATCCT CGCGTGGATT GGTTAATCGA GTTCTTAAAG
TCGCACCGCA GCAAGAAAGT GCTGATCATC GCCAGTGGCG CCGATACCGC CCTGAGCTTA
GAAGAAGCCC TGCGTACCCG TGAAGGCATC CAAGCCACAG TATTCCACGA AGGCATGTCA
ATCATCGAGC GCGACAAGGC AGGAGCCTAC TTCGCCCAAG AAGAAGGTGG CGCCCAAGCG
CTGATCTGTT CTGAAATCGG CTCCGAAGGT CGTAACTTCC AGTTCGCCAG CCACTTAGTG
CTGTTCGATC TGCCATTGAA CCCAGATTTA TTAGAGCAAC GTATCGGCCG CTTAGACCGT
ATCGGGCAGC AGAACGATAT CCAAATTCAC CTGCCTTATC TGCAAGATAC GGCGCAGGAG
CGTCTACTCA ACTGGTATCA CCAAGGTCTG AATGCCTTCG AGCTGACCTG TCCAAGTGGC
CATGTGCTGT ACAGTGAATT TGCCGAAGAT CTATTGAATG TTCTCGTCGG CGGGGATGAA
GATGAGTTGA CCAATCTGCT CAACCACACC CAAAGCCGTT ACAAAGAACT GAAACACGCT
ATGGAGCAAG GCCGCGATAA GCTGCTGGAA ATCAACTCCC ACGGTGGCGA TAAGGCCAAG
GCGATTGTCG AGCGTTTAGC CCAAAGCGAT CAGGATACTA AGCTGATTGG TTCGGTGATC
CGCTTGTGGG ACATTATCGG TGTCGATCAA GAAGATAAAG GTGAGAACTC TATCATCCTG
CGTCCAAGTG AACACATGAT GTTCCCAACC TATCCAGGCC TGTATGAAGA TGGCGTAACC
GTCACCTTCG ACCGTGATAC CGCACTCTCC CGTGACGATA TAGCTCTGAT CACCCAAGAG
CACCCGTTGG TGCAAACAGG CTTAGATCTG ATCACCGGCT CTGACACAGG CACGACGAGC
GTCGCGATTT TGAAAAACAA AGCCTTACCC GCGGGCACCC TGTTCTTAGA ACTGATCTAC
ATGGCGGATG CCTCGGCGCC TAAATCCAGC CAGCTATATC GTTATCTGCC ACCGACGCCT
ATCCGCGTAC TGCTGGATAA AAACGGTAAC GATTTGTCCG CTAAGGTGGA TTACACCAGC
TTTGACAAAC AGTTAAGCGC GGTTAACCGC CATATTGGTA GCAAGTTAGT CACAGCATCC
CAACCGATTC TGCATCCGTT ATTTGCTAAG GGCGAAGAAT ATGCCCAAGC CGCGGTGAAC
GAGTTAGTGG CGCAGGCGCG TGAGAAAATG ACCAGCCAAC TGACGGGCGA ATTAGACCGT
TTAGAGTCCT TGAAAGCGGT TAACCCGAAT ATCCGTGAAG AAGAGTTGGA ATACTTGCGT
AATCAAATGC AGGAACTAAG CACTTACCTC GACGCGAGTC AGCTACAGCT CGACGCGATT
CGTATGGTAC TGGTTAGCCA TGTCTAA
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRNEAPL TRVIYNPGDT
VESHEGWSLS VEELTEKDGL VVYHGIHSET GEKASLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGIRYQ CQLLRHQLAT SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RVLIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAFAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVVPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEENSYKDV AVAAEALAGD
AKLSDAAINS LTELLSEKDI APSIRLIQAE DIDSELQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRIFNAYPHA MPEQYLTAAR VNEMMGGRKT LEAKAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASGADTALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQQNDIQIH LPYLQDTAQE RLLNWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVGGDE
DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGDKAK AIVERLAQSD QDTKLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLYEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSDTGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRVLLDKNGN DLSAKVDYTS FDKQLSAVNR HIGSKLVTAS QPILHPLFAK GEEYAQAAVN
ELVAQAREKM TSQLTGELDR LESLKAVNPN IREEELEYLR NQMQELSTYL DASQLQLDAI
RMVLVSHV
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