| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3453 |
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| Symbol | |
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| ID | 4255460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4093149 |
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| End bp | 4096859 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124138 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_739491 |
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| Protein GI | 114048941 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTCCAATTA AAATCGCCGA TCCAAAAGAA CTATAACCGT
GCCGTTTTTT ATACCTATAT CGGCGTGATT GTCCTGTCGT TGCTGACGGC GTGGATGTTT
TTCGATCGCC AGAAAACCCA GCAGATGGAG CAGCGCGAAG AACAGGTCGA GCGCCACGTA
TTGCAAATCG ACTTGCTGTT GGAATCGAGC ATCCGCGCGG TCAAGAGTCT GCGGGATGTG
GCCGTGGATC ACTTACGTTT AGGTGAACTA GTGCGTAAGG AGCGTTTACC GCAATACGGC
AAATTTAACG AGAGTGGTCA GTATTTTACC TTAGAGCCTA ACTACGCCAA GGGTGGTAAA
CCCTTTACCA ACATGGGGCG GATCACTGGC GCGGGTTCCC TCGATGGTCG CAGCGATAAG
TTCTACCAAG AGCTGGAAAT GCTGTTCGAG TTGTCACTGT CTTTCCCTGT CGCTAAGGAA
GCCGCGCCTA AAGCCTCGGC GATTTATTAT TTATCGCGCC AACGGATGAT GTCCTACTTC
CCTTGGACCA ACGGCGACCA GCGTTTTAGG GACGAGCTGC TCAATAAGAA ACAATTCCAA
TACGCCACCC CGGCGATGAA CCCGCAGCGC AGCGTGTTTT GGAGTGAGGC CTATGTCGAT
TCGACGGGTA AAGGCTTGCT GACCACCTTA GGTGTGCCCG TTTATCTCGA TGATGAGTTT
ATGGGTTCGA TCAACCTCGA CATGACCTTA GCCTCATTGG CGCGGCAAAT TCGGGTGTAC
TTCAAAATGC CGGGGACTGT GATCCTGCTC GATCAGCAGA ACAATATTTT GTCCCACAGC
GACTTCGATG GTTCAGATAT CAATCGGGTG TATCACATCA GCCAGCGTAT TCCATCTGAG
CTGCATTCGC TCCCTGAGTC CGAATTGTTC GATGCCCATG AAGGCATTAT TCGTAACGGT
TACTATATTC ACTCGGTCGC GCTGCATAAC GCGCCGTGGC GCTTGTTGTA TCTGCAGAAT
GAAGACGACC TGTTCCAAGA TTCGGTCGAA AAACTGCAGC TGACCTTTAT CCTCGTAGTC
ATCGCTCTGT CGGTGCTGGT GACCATAGTG CACTGGCAAA CGCGCCGCTC CTTCGTGAGC
CCCGCATCGC GCCTATTGTC GCACTTAGAG GGCTGCTCCC AAGAGCCGCG TAAACCGCCG
GAAAAAATCA CTCCCGGGTG GGAGCCTTGG TTCCTGCTGG TGAGCCGCAT CTTTGAGGAA
AATAAGCAAT ACACCCATCA TTTGGCCGAG CAGAATAAGC GACTCGACAA ATTGGTGGCG
CGCCGCACCG AGCGGTTAAA AGATGCTACT GAGCGGCGCG AGCGGGAATA TGCGTTGTTG
CGCTCATTAC TCGACTCCAT CCCAGAAGCC ATCGTCTTTA AAGATAAAGA AGGCAATTAC
CTCGGCTGTA ACAAGGCCGC CGAGCGGATG CTGGGTTACA CCGAAAGCGA GATGATTGGT
CTGTCGTCGG AGGATTTAAC CTCGCCAGAG ATGGGCATTC GTATTCGCGC CGAGGATGAA
CAGATCTTAA AAGATCGTAC GCCGCTGCGT TATCAAGAGA AAGTCGAGTT AGCGGGCAAA
CCTGTATTGC TCGATACCCT TAAACTGCCT TTCTATAACC GCCGTGGCGA GCTGCAAGGC
TTGATTGCCG TGTGGCGCGA TGTGACGCGT GAGTACGAGT CCGCCGAGCA GTTACGACTG
TCGGAAGAGC GTTACCATCT AGCGATGGAC GCGGTGGAAG ACGGTCTGTG GGACTGGTAT
CTGGATTCGG AGCATATTAT TTGCAACCCA TCCTATTATT CGATGCTGGG CTATAAACCC
AATGAATTCC CTGCGTTAGT GTCGGCTATC GACCAGCTGA CGCATCCCGA CGATAGAATT
CGCGTCGAAG AATATCGTAA TCAGTATCTG CAAAATCCCG TCGATGCCTA TGAGATCGAG
TTTAGGATCT TAGGCAAAAA CGGCAGTTAT CACTGGGTGC TTTCCCGCGG CCGGGTGGTG
GAATTTACCG CCGATGGTCA GCCTAAGCGT ATGGTCGGTA CCCATAAGGA CATCACGCGC
CATAAGAGTA ACGAAGTGGC ACTGCTGGAG GCGAAGCAGG ACGCGGAACT GGCGAACCTG
TATAAGAGTG AGTTCTTGGC GAATATGAGC CACGAAATCC GCACGCCTAT GAACGCCATT
ATCGGCATGT TGCAGTTAGC GCAGCGCACC TCACTGACGG CGCAGCAGAA GGATTACCTC
GAAAAGGCCG GATTCTCCGC GCAGTCGTTG CTGCGGATTA TTAACGATAT TCTCGACTTC
TCTAAGATTG AGGCGGGTAA ATTAGAGCTG GAGCGGGTGC CGTTCCCACT GGATAAAGTG
CTCGACCATG CCCTCGATCT CAATGCGCTT AAGGCGCAGG AGCAAGGCGT CGAGTTATTG
CTGTATGCGC CAGTCACGGC AGGCCTCATT CTTAAGGGCG ACCCGCTGCG TCTAGGCCAA
GTGCTGATCA ACCTATTATC GAACGCGGTG AAGTTTACCC AATCCGGTGA GATTGAACTG
GGCTGCGAAG ATGTGGGCGA GCGCGACCAT CGGATTACCT TAAAATTCTG GGTACGGGAT
ACGGGTATTG GGATCAGTAA AGATCAGCAG GAAAAACTGT TTGATGCCTT TGCCCAGGCC
GATGGCTCGA CGACCCGTAA GTACGGTGGT ACGGGATTAG GTTTATCGAT CAGTAAGCAT
TTGGTCTCCA TGATGGGCGG CAAGATGCAA GTGCAGAGTG AATTAGGCGT TGGCAGTACC
TTCAGCTTTA CCATCAGCTT TGAGATTGCC GAAGAGGCCA AGGTTGAGCC CTTAGTGGTG
CCTGAAAAAC TCAATAATTT ACGCACACTT GTGGTGGATG ATAACCCAAC GGCGCTGCAA
ATTTACTCGG CGTTGATGCG CGATTTCCAC TTCGAGGTGG ATACGGCTGC GAGCGGCGCC
GAGGCGCTGT ATAAGTTGTC GCGGGATCCT ATCGATTTAT TGTTGCTCGA CTGGATGATG
CCAGAGATGG ATGGTGGCGA TGTGATCAGC GCCATCGATA CCATGGTGGC CGAAGGCCGC
ATCGCAAAAC GGCCCATTAT CATCATGATG ACCGCCTATG CGGCGGAACC TTTACAGCAC
GAAGTCGACA GTGCCAATGT GTTTGCTGTG TTGCAAAAAC CCTTTAAGGC ATCGAGTCTG
TTCGATGAGA TCATCGCCGC CTTTGCCGAT GAGCCAAGGC TTAATGTGGT GCAGCCTATT
GATGAAGTGC CGGTAGAAGA GGGCGAACAC ACAGGGCTTG TGCTCTTGGT AGAAGATAAC
TTTATCAACC AACAGGTGGC GACAGAGCTG CTAAAGAGCG CTGGATACGA AGTCGTTGTT
GCTGGGAATG GCCAAATTGC CCTCGATATT ATCGACTCTC GCCCCTTCGA TGCGGTATTA
ATGGATATTC AAATGCCAGT AATGGACGGG TTAACCGCGG CGCGGGCACT GCGTGAACGC
TTTAGTGCCG ACGTGCTGCC TATTATCGCC ATGACGGCCC ATGCGATGTC GGGCGATCGA
GAAAAGAGTC TCGCGGCTGG GATGAATGCC CATATTACTA AGCCGATAGT GTTAACTGAA
CTGTTTGAAA CCTTATCGCA TTGGATAAAA CACAAGAATA ATCATCATTA A
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| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VLSLLTAWMF FDRQKTQQME QREEQVERHV
LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPNYAKGGK
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRMMSYF
PWTNGDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF
MGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDGSDINRV YHISQRIPSE
LHSLPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQN EDDLFQDSVE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITPGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDAT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QILKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEHIICNP SYYSMLGYKP NEFPALVSAI DQLTHPDDRI RVEEYRNQYL QNPVDAYEIE
FRILGKNGSY HWVLSRGRVV EFTADGQPKR MVGTHKDITR HKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV
PEKLNNLRTL VVDDNPTALQ IYSALMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM
PEMDGGDVIS AIDTMVAEGR IAKRPIIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQPI DEVPVEEGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVV
AGNGQIALDI IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADVLPIIA MTAHAMSGDR
EKSLAAGMNA HITKPIVLTE LFETLSHWIK HKNNHH
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