| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3451 |
|---|
| Symbol | |
|---|
| ID | 4255458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4088812 |
|---|
| End bp | 4090620 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638124136 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_739489 |
|---|
| Protein GI | 114048939 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAACAC CCCAATTACA ACATTTTTAC ATTTCCGAAG AGCAATCCAT TTACTTGCTC
AAAGCCAACG ATGCCCGTAA GCACAAGGCG TGGATCCGTT TATGTAAACA ACAGTTAAGT
AAGTTGGGTT ATCGCGACAT TGAGTTTATC GGTAAGGGGG CTTACGGCTT TGTGTTTGCG
GGAATTAATC AGGCCGACGA AGCCCATGTA TTTAAATTCT CAAGAATTAA TCTGCCGCAG
CATATTCAAG ATCGCTTAGA GGAAGAAGCC TTTATGTTGT CCTTGCTCAA ACACCCCAAT
ATTCCGGGGG CGATCAAATT TGAGCGGGTC GGTAAACAAG GGATCTTAGT GATGGAGCGT
GCTAAGGGCG AAGATCTCGA GCAGCTTTGT CGCCGCTTAG GCGCCCTCCC CCCCGCCATG
GTGATGAGCA TCGCCCGCCA ACTGGCCGAT ATTCTCTACT ATCTGCGAAC GGGTAAACCC
TTAGTGCATG GCGACATTAA GCCTTCAAAC CTTGTTTATG ATATTGAAAG CCAACATTTA
TCCTTAATCG ACTGGGGTTC GGCCGTATTT GCGCAACGGG ATGAATATAA CAAGGCCGTT
GAAGACAATG TGATGACGCT GATGTCGAGC GATCAGCAGC ACACTAATGC CCGCATGGGG
GACGTGTATT TTATCGGTGA AGAACAGCTA AATGGCGCGC TCTCCAGCCC ACGTTTCGAC
GAGCAAGGCG TGGCAGCGAC CTTATATGCC TTGGCCTCAG GACAGGCGAG TCGCTTCGGC
GCACAGGTGA TCCCGCCTAC CAGCATAGGC TTACCCATGG AGTTAGCTCG CACCTTGGAA
GGCATGCTCA GTAGCGATGC CGTGCAGCGC AATCTGGCGG GGGATTATTT TCTCAAAAGC
ATGCGCCACA GCCATAGAAT ACATTTACCC GAACTGCCCA AAACCGAACT GCTGGGTGAA
ATCCCCGTCT GGGTGCAATC CCGCGAGAAA GATGTCGAAA CCGTCAGTTA CAGCTCGCGT
AAATCCTTTT TAAAGGAACA TAACGCGCAG GATCCCATCG CTAAGATGGA TGACATTCAG
CTCGAAAAAT ACTATCGCAA CTTCTTAGCC GGCATGGGCG ATACCGAAAA GGGCTTTATC
GCCGCCGTGG GGCGACTCGG CCAATATCCC ATAGTGGGCG GCCTTGCCAT CCATTGGCAA
GAAACTGGCG TGTTTATCGA CTCCAACCTG GCCATCTACG ATGCTAAACA AAAGAGTGCC
CTCATCATCG CCGTCAATAA TATGGTGACG CTCGCGCGGG GGATTAAGCG TATCGGGGTG
TTTAAGGCCT GCTTCTTTAA CGCAAGGGAT ACGCTGCATA TCGAGCGCGA AAACACCAGC
GAACCCTTTG TCGCCAGCGC CGATCTCCAA CTGCCCTTCG AGGTGGGTGA TGTACCGACC
CTCGAAGATA AATCTCGGCT GCACTCTTAC TTTGAAGACG GTAAGGATCC GGATGAAAAC
CTCGAATTAC CGAGTGAAAT CATGGAGGAA TTGGCGCGTA TCAACCAAAT CCACCACACG
GGCTGCATCA TTTTTGAAGC GCTGCCGAAT CACTTAAAGA TCCACAGTTA CTTAAAACTG
CTCAACCCGC GTAAACAGGC GGCGTTTCGG GCTAGCCTCG ACCGAATTTT GCATTATGTC
GGTAAAATTC AAGGTCATGG GGTGTCGGGC TTTATGAAAC TGCCCTATAA AAATACTCGC
CGCTTTACTC ATATTGAGCG AAAAGCCGAG CATTTTTATC CAAGAAATCC AAAAGAAATA
GGCGCATAA
|
|---|
| Protein sequence | MQTPQLQHFY ISEEQSIYLL KANDARKHKA WIRLCKQQLS KLGYRDIEFI GKGAYGFVFA
GINQADEAHV FKFSRINLPQ HIQDRLEEEA FMLSLLKHPN IPGAIKFERV GKQGILVMER
AKGEDLEQLC RRLGALPPAM VMSIARQLAD ILYYLRTGKP LVHGDIKPSN LVYDIESQHL
SLIDWGSAVF AQRDEYNKAV EDNVMTLMSS DQQHTNARMG DVYFIGEEQL NGALSSPRFD
EQGVAATLYA LASGQASRFG AQVIPPTSIG LPMELARTLE GMLSSDAVQR NLAGDYFLKS
MRHSHRIHLP ELPKTELLGE IPVWVQSREK DVETVSYSSR KSFLKEHNAQ DPIAKMDDIQ
LEKYYRNFLA GMGDTEKGFI AAVGRLGQYP IVGGLAIHWQ ETGVFIDSNL AIYDAKQKSA
LIIAVNNMVT LARGIKRIGV FKACFFNARD TLHIERENTS EPFVASADLQ LPFEVGDVPT
LEDKSRLHSY FEDGKDPDEN LELPSEIMEE LARINQIHHT GCIIFEALPN HLKIHSYLKL
LNPRKQAAFR ASLDRILHYV GKIQGHGVSG FMKLPYKNTR RFTHIERKAE HFYPRNPKEI
GA
|
|---|
| |