Gene Shewmr7_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3444 
Symbol 
ID4255451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4083060 
End bp4083782 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID638124129 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_739482 
Protein GI114048932 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATTT TTGCTCACCG TGGCGCCAGC GGTTATGTGG CGGAAAATAC CTTAGCCGCC 
ATGGCCAAAG CCATTGAGTT AGGTGCCAAA GCCATTGAGC TGGATGTGCA TAATGTCGAA
GGGGAGTTAG TGGTATTTCA CGACCGCAGA CTCGACAGTA AGAGCTCGGG CCAAGGTATC
ATCCACTTAG TCAACAAAGA GTATTTGGGC AAGGTCACAG TCAAAGGTGA GCCTATTCCC
ACGCTCTGGC AAGTGCTCGA ACTGGTTGCT GGCCGCGCCA CAATCAACAT CGAACTTAAA
GGGGTGAATA CGGTAGCGCC GCTACTCGAA CTTTATCCAA AGGCCATTAT GGAGCTTGGT
TTCAGCACTG AGCAGTTACT GATTTCCTCC TTCAATCACC CTTATTTACA GCAAGTCAAA
CAGGCTCTGC CACAAGCATT GATCGCGCCC TTGCTCGCCA GTATTCCCCT CGATGGTGCG
GCAGTGGTGA GCGAGTTAGC CGCCTATTCC CTGCATTTAG ACGTGAGTTT TATCAGCAAG
GCCCTAGTGG ACGACGCCCA CCAGAGGGGC GCTAAGGTGT ATGTTTACAC CGTCGATCAT
AGTGATGATA TCCATGCCCT TAAGCAGTTG GGGGTCGATG GGATCTTTAG CAATTACCCC
GACCGTGCCA TGCAGGCGCT GTTACAACCG ACTGATGCTG ATTATTGCGG CTATTTCGAA
TAA
 
Protein sequence
MLIFAHRGAS GYVAENTLAA MAKAIELGAK AIELDVHNVE GELVVFHDRR LDSKSSGQGI 
IHLVNKEYLG KVTVKGEPIP TLWQVLELVA GRATINIELK GVNTVAPLLE LYPKAIMELG
FSTEQLLISS FNHPYLQQVK QALPQALIAP LLASIPLDGA AVVSELAAYS LHLDVSFISK
ALVDDAHQRG AKVYVYTVDH SDDIHALKQL GVDGIFSNYP DRAMQALLQP TDADYCGYFE