| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3441 |
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| Symbol | psd |
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| ID | 4255448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4077995 |
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| End bp | 4078873 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124126 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_739479 |
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| Protein GI | 114048929 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAAG TTAAAATTGC GCTACAGTAC ATGCTGCCAA AGCACCTGTT ATCTCGCTTA
GTCGGTAAAC TTGCCGCTTC CGAAGCTGGC GCATTAACGA CTGCCGCGAT TAAATGGTTT
ATCAAGCAAT ATAAAATCGA TATGAGCGAA GCGGCTCAGA GCGAACCCGA AGCCTATAAA
AGCTTCAACG ACTTTTTTAC CCGCGCACTA AAGCCTGGTA TTCGCCCAAT TAATACTGCG
GCCAATATCA TGGTGCATCC TGTTGATGGC GCCGTCAGCC AACTAGGCCC CATCAAGGAT
GGCCGTATTT TTCAAGCTAA AGGCCATCAC TATTCCTCAC TCACTTTGCT TGGCGACCAA
GCCGAAGATG CCAAACGATT CGAAGGTGGG GATTTTGCGA CAATTTATCT GGCTCCCAAG
GATTATCACC GCATCCATAT GCCGATAAAG GGCACACTGT CGAAGATGAC CTATGTACCG
GGCGAGTTGT TTTCCGTTAA CCCCTTAACG GCGCGCCATG TACCAGGCCT GTTTGCTCGC
AACGAACGTG TTGTGGCAAT TTTTGAAACA GAGCTTGGCC CGCTAGCTAT GGTATTAGTA
GGTGCGACCA TTGTGGCCAG TATCGAAACC GTGTGGGCAG GCACTATTAC GCCGCCAACG
GGTAAGCAAG TGTTCACATG GGAATACCCA ACAGTAGGTC CAGACGCCAT TACCTTAGAT
AAAGGCGAAG AAATGGGCCG CTTCAAGCTT GGCAGTACCG TCGTCATGCT GTTTGCTAAA
GATGCTATCG ACACCTTCGC CGAAGGCGTT GAGCCCGAAG CAGTAACGCG TATGGGTCAA
GCCTTTGCTA ATCTCAAAAA TCAGGCGTCA GCCGACTAA
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| Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAASEAG ALTTAAIKWF IKQYKIDMSE AAQSEPEAYK
SFNDFFTRAL KPGIRPINTA ANIMVHPVDG AVSQLGPIKD GRIFQAKGHH YSSLTLLGDQ
AEDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARHVPGLFAR
NERVVAIFET ELGPLAMVLV GATIVASIET VWAGTITPPT GKQVFTWEYP TVGPDAITLD
KGEEMGRFKL GSTVVMLFAK DAIDTFAEGV EPEAVTRMGQ AFANLKNQAS AD
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