Gene Shewmr7_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3437 
Symbol 
ID4255444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4072818 
End bp4074317 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content54% 
IMG OID638124118 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_739475 
Protein GI114048925 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.446111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.221498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG ATTTATCGAG TTTACCCACG GCGCTTTATA CGCAGCAGCA GGTGAGAGCC 
GCCGAATTGC TCGCTGTTTC AGAAGGGGAA ACCACTTTAT ATCAATTAGT TGAACGTGCT
GGTCGAGCGG CATTTGAGTG TTTTACTGAG CAGCGTGAAC TCCATTCTCA GCTTGAAGGA
ATGCCTTTAC TGGTATTAGC AGGCAGCGGC AATAATGGCG CCGATGCGCT AGTCTGCGCG
CGCCTAGCCT TAGAAGCAGG ACATCAGGTC AAGGTGTACT TGCTCAAGAC CCGAGGCACA
GCTGAATTCG AGCAGGCACT TTCTGCCTAT CTAAACCAGG GCGGTGTTAT CGATTCCCCA
AATATCGAAG CGATACAACA GGCGCCAGTC ATTATCGATG GTCTACTGGG CACGGGAGTT
AAGGGCGCAG TGCGTGAGGA TATTGCTGCA CTGATCCATG CCGTCAATCA GAGTGAGGCT
TGGGTGCTGA GTTTAGATCT GCCCTCGGGG ATCGTTGCCG ATACAGGCGT TGTGGCTCAA
GCCGCGGTGA TGGCGGATGT CACTCTGTGC TTTGGCGGGT TAAAACAGGG GCTTTTGACC
AGTAAGGCGA GACATCACTG CGGCTATTTG GCCTTTGCCG ATCTGGGATT AACACCTTTC
TTCGATACAG AGAGTGCAAC GCGAGTCGGC GGTGAAATGT TAAAAGACCA TTTTGCCGCA
AGAGCACGGG ACAGCCACAA GGGGCAATCG GGCAAAGTAA CGCTGATCGG TGGTGACTTT
GGTATGGCAG GAGCCATTCG CCTCGCCAGT GAGGCCTGTT TACGTGCGGG CGCCGGATTG
GTGACTGTGA TCAGTCGCCC TGAGCATCAA CTCACTGTCA ACGTCTCACG ACCCGAATTG
ATGTTTTGGG GCTGTGAACT GGTCGATATG GAAGTGTATT TACGCCTGGG TTGGGCGCAG
GTGGTGGTGC TTGGCCCCGG TTTAGGAAAA CACGACTGGG GCTATAACTT GTTTAAAGCC
GCAGGCTTAA GTGATAGACC CTGTGTGCTC GATGCTGATG CCCTGAATCT GCTCAGTCAA
GAACCGCGCA GGCAAACCAA CTGGGTACTC ACGCCTCATC CCGGCGAGGC TGCGCGGCTC
TTGGGATGCA GTGTGGCCGA CATTGAGCTG GATAGATTCG CTGCCGTGCG TGCTCTGCAG
CAAAAATATG GCGGCGTGGT GCTGCTCAAA GGCGCTGGCA CAGTCATATT TGATGGAAAA
CAGATGGTCG TGGCACCTGT TGGAAATCCT GGGCTTGCGA GTGGTGGGTG CGGCGATGTG
TTATCTGGTA TTATAGGCGC ACTTATGGCT CAAGGAATGG ATAACATGCA GGCGACCGTT
GTAGGGGTTG TCGTTCATGG CTGCGCGGCG GATTTGGCTG CAGTGCAGGG TGAACGGGGC
ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
 
Protein sequence
MAQDLSSLPT ALYTQQQVRA AELLAVSEGE TTLYQLVERA GRAAFECFTE QRELHSQLEG 
MPLLVLAGSG NNGADALVCA RLALEAGHQV KVYLLKTRGT AEFEQALSAY LNQGGVIDSP
NIEAIQQAPV IIDGLLGTGV KGAVREDIAA LIHAVNQSEA WVLSLDLPSG IVADTGVVAQ
AAVMADVTLC FGGLKQGLLT SKARHHCGYL AFADLGLTPF FDTESATRVG GEMLKDHFAA
RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL
MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDRPCVL DADALNLLSQ
EPRRQTNWVL TPHPGEAARL LGCSVADIEL DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK
QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG
MLASDLMPFI RQLVNSDLL