Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3437 |
Symbol | |
ID | 4255444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4072818 |
End bp | 4074317 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638124118 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_739475 |
Protein GI | 114048925 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.446111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.221498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAG ATTTATCGAG TTTACCCACG GCGCTTTATA CGCAGCAGCA GGTGAGAGCC GCCGAATTGC TCGCTGTTTC AGAAGGGGAA ACCACTTTAT ATCAATTAGT TGAACGTGCT GGTCGAGCGG CATTTGAGTG TTTTACTGAG CAGCGTGAAC TCCATTCTCA GCTTGAAGGA ATGCCTTTAC TGGTATTAGC AGGCAGCGGC AATAATGGCG CCGATGCGCT AGTCTGCGCG CGCCTAGCCT TAGAAGCAGG ACATCAGGTC AAGGTGTACT TGCTCAAGAC CCGAGGCACA GCTGAATTCG AGCAGGCACT TTCTGCCTAT CTAAACCAGG GCGGTGTTAT CGATTCCCCA AATATCGAAG CGATACAACA GGCGCCAGTC ATTATCGATG GTCTACTGGG CACGGGAGTT AAGGGCGCAG TGCGTGAGGA TATTGCTGCA CTGATCCATG CCGTCAATCA GAGTGAGGCT TGGGTGCTGA GTTTAGATCT GCCCTCGGGG ATCGTTGCCG ATACAGGCGT TGTGGCTCAA GCCGCGGTGA TGGCGGATGT CACTCTGTGC TTTGGCGGGT TAAAACAGGG GCTTTTGACC AGTAAGGCGA GACATCACTG CGGCTATTTG GCCTTTGCCG ATCTGGGATT AACACCTTTC TTCGATACAG AGAGTGCAAC GCGAGTCGGC GGTGAAATGT TAAAAGACCA TTTTGCCGCA AGAGCACGGG ACAGCCACAA GGGGCAATCG GGCAAAGTAA CGCTGATCGG TGGTGACTTT GGTATGGCAG GAGCCATTCG CCTCGCCAGT GAGGCCTGTT TACGTGCGGG CGCCGGATTG GTGACTGTGA TCAGTCGCCC TGAGCATCAA CTCACTGTCA ACGTCTCACG ACCCGAATTG ATGTTTTGGG GCTGTGAACT GGTCGATATG GAAGTGTATT TACGCCTGGG TTGGGCGCAG GTGGTGGTGC TTGGCCCCGG TTTAGGAAAA CACGACTGGG GCTATAACTT GTTTAAAGCC GCAGGCTTAA GTGATAGACC CTGTGTGCTC GATGCTGATG CCCTGAATCT GCTCAGTCAA GAACCGCGCA GGCAAACCAA CTGGGTACTC ACGCCTCATC CCGGCGAGGC TGCGCGGCTC TTGGGATGCA GTGTGGCCGA CATTGAGCTG GATAGATTCG CTGCCGTGCG TGCTCTGCAG CAAAAATATG GCGGCGTGGT GCTGCTCAAA GGCGCTGGCA CAGTCATATT TGATGGAAAA CAGATGGTCG TGGCACCTGT TGGAAATCCT GGGCTTGCGA GTGGTGGGTG CGGCGATGTG TTATCTGGTA TTATAGGCGC ACTTATGGCT CAAGGAATGG ATAACATGCA GGCGACCGTT GTAGGGGTTG TCGTTCATGG CTGCGCGGCG GATTTGGCTG CAGTGCAGGG TGAACGGGGC ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
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Protein sequence | MAQDLSSLPT ALYTQQQVRA AELLAVSEGE TTLYQLVERA GRAAFECFTE QRELHSQLEG MPLLVLAGSG NNGADALVCA RLALEAGHQV KVYLLKTRGT AEFEQALSAY LNQGGVIDSP NIEAIQQAPV IIDGLLGTGV KGAVREDIAA LIHAVNQSEA WVLSLDLPSG IVADTGVVAQ AAVMADVTLC FGGLKQGLLT SKARHHCGYL AFADLGLTPF FDTESATRVG GEMLKDHFAA RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDRPCVL DADALNLLSQ EPRRQTNWVL TPHPGEAARL LGCSVADIEL DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG MLASDLMPFI RQLVNSDLL
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