Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3424 |
Symbol | |
ID | 4256696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4060205 |
End bp | 4060642 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638124105 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | YP_739462 |
Protein GI | 114048912 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.288679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0982485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGT TGACTCCAAA TCGTCCTTAT TTACTCAGGG CTTACTACGA TTGGTTGATG GACAACCAAT TAACGCCTCA CGTTGTCGTG GATGCCTTTG TGAAAGGCAC TCAAGTACCG CAGCAATACG TGAAGGATGG CCAGATTGTA TTAAATATCG CGGCCGGCGC AGTGGGCAAT TTGCAAATTG GTAATGAATT TGTGGAGTTC AATGCGCGTT TTGGTGGTGT ACCTCAGCAG GTACTATTAC CAATGGCTTC GATTGTAGCC ATTTACGCCC GTGAAAATGG CGCAGGAACT GTCTTCGATA TTGAAGATGC GTACTTAGTC GAAGAGGAAG CCGAATCGAC TTTGTCCGTT ATCGAGACAA ACGAGAAGCC AACCGAACCA ACGGATGAGC CTCCTAAGCG CCGCAGTCAT TTAACTTTGG TTAAGTAA
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Protein sequence | MKALTPNRPY LLRAYYDWLM DNQLTPHVVV DAFVKGTQVP QQYVKDGQIV LNIAAGAVGN LQIGNEFVEF NARFGGVPQQ VLLPMASIVA IYARENGAGT VFDIEDAYLV EEEAESTLSV IETNEKPTEP TDEPPKRRSH LTLVK
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