Gene Shewmr7_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3423 
Symbol 
ID4256695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4059458 
End bp4060048 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID638124104 
Productaminodeoxychorismate synthase, glutamine amidotransferase subunit 
Protein accessionYP_739461 
Protein GI114048911 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.585956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0957331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTAA TGATCGACAA TTACGACTCT TTCACCTTTA ACTTAGTGCA GTATTTTCAG 
CAGTTAGGGC AAGAGATTGT GGTTAAACGC AATGATGAAA TCAGCTTAGC GCAAATCGAG
GCGTTGGCAC CGAGCCATTT AGTTATCTCT CCCGGGCCTT GTTCGCCAAA TGAAGCGGGG
ATTTCCCTCG CGGCGATTGA GCACTTTGCT ACGCGTTTAC CTATCCTGGG TGTGTGTTTA
GGGCATCAAG CCATGGCGCA GGTGTTTGGT GCTAAGGTTG TGCGAGCGCA GCGAGTGATG
CATGGCAAAG TCAGTGCGAT TGGCCATACA GGCGAGCGCC TGTTTAAAGG GTTAAATCAG
CCATTAACTG TAACCCGCTA TCACTCACTG CTGGTCGATG CTGTCCCTGA GGGATTTGTG
TTGGATGCTT GGTTTGACGA CCCAACTCAT GGCCGCGAAA TCATGGCCAT GAGCCATAAG
CAGCTGCCAC TCTTTGGTGT GCAATTTCAC CCCGAGTCAA TTTTGACCGA GCAAGGCCAT
GAATTATTGG CAAATTTCTT GTCGCAATCG GCTCTTACTT GCGGTAATTA G
 
Protein sequence
MLLMIDNYDS FTFNLVQYFQ QLGQEIVVKR NDEISLAQIE ALAPSHLVIS PGPCSPNEAG 
ISLAAIEHFA TRLPILGVCL GHQAMAQVFG AKVVRAQRVM HGKVSAIGHT GERLFKGLNQ
PLTVTRYHSL LVDAVPEGFV LDAWFDDPTH GREIMAMSHK QLPLFGVQFH PESILTEQGH
ELLANFLSQS ALTCGN