Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3419 |
Symbol | argD |
ID | 4254685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4052888 |
End bp | 4054105 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124100 |
Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
Protein accession | YP_739457 |
Protein GI | 114048907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.103737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTG ATATGAAGTT GAATCGTGCC CAGTTTGATG CGGTTATGGT GCCTAACTAT GCGCCTGCTG CCGTGATCCC TGTACGTGGC GAAGGAAGCC GAGTATGGGA TCAAGAGGGT AACGAGTTTA TCGATTTTGC CGGCGGTATC GCGGTAAATT GCTTAGGTCA CTGTCATCCA GCCTTAGTAA ATGCCTTAAA AACGCAAGGC GAAAAATTAT GGCACCTGTC TAACGTGATG ACCAACGAGC CAGCGCTTGA GCTTGCGACT AAGTTGGTTA ACAGCACGTT TGCTGAGCGT GTGTATTTTG CTAACTCTGG CGCCGAAGCC AACGAAGCGG CACTGAAATT AGCCCGTCGT TACGCCTTAG AAAAATTCGG CGTAGAGAAA GATGAAATCA TCGCCTTCGA TAAAGCCTTC CACGGTCGTA CTTTCTTCAC CGTGAGCGTT GGCGGTCAAG CGGCTTATTC AGATGGTTTT GGTCCAAAAC CACAAAGCAT CACCCACTTA CCTTATAACG ATGTTGCGGC ATTAGAAGCG GCCGTATCGG ATAAAACTTG CGCCATTATG CTTGAGCCAC TGCAGGGTGA GGGCGGTATT ATCGATGCCG ATCCTGCATT CTTAAAAGCG GTTCGCGAAC TGGCCAACAA GCACAACGCA CTGGTGATTT TCGACGAAGT ACAAACCGGT GTCGGCCGTA CTGGCGAGCT CTACGCTTAC ATGGGCACCG ACATAGTGCC GGATATCCTG ACCACGGCTA AAGCGCTAGG CGGCGGTTTC CCTATCGCAG CTATGCTGAC TACCGCTGAA ATTGCTGAGC ACCTGAAAGT GGGTACTCAC GGTTCAACCT ACGGTGGTAA CCCATTAGCT TGTGCTATCG GTAACGCGGT ATTAGACGTG GTTAACACAC CAGAAGTCTT GAACGGTGTG AAACATCGCG AGCAGTTATT ACGCGATGGT CTGAACAAAA TTAATGAAAA ATATCATGTT TTCTCTGAAA TTCGCGGTAA AGGCTTGCTG TTAGGGGCGG TTCTAAACGA ACAGTACCAA GGTCGTTCAC GTGACTTTTT AGTAGCGTCT GTTGCAGAAG GCTTAATGAG CCTGATGGCG GGTGCTAACG TGGTACGTTT TGCTCCTTCA CTGGTGATCC CTGAGGCAGA TATTGCAGAA GGCCTAGCAC GTTTTGAGCG TGCTGTGGCG AGCATCGCTG CTGCCTAA
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Protein sequence | MSVDMKLNRA QFDAVMVPNY APAAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP ALVNALKTQG EKLWHLSNVM TNEPALELAT KLVNSTFAER VYFANSGAEA NEAALKLARR YALEKFGVEK DEIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHL PYNDVAALEA AVSDKTCAIM LEPLQGEGGI IDADPAFLKA VRELANKHNA LVIFDEVQTG VGRTGELYAY MGTDIVPDIL TTAKALGGGF PIAAMLTTAE IAEHLKVGTH GSTYGGNPLA CAIGNAVLDV VNTPEVLNGV KHREQLLRDG LNKINEKYHV FSEIRGKGLL LGAVLNEQYQ GRSRDFLVAS VAEGLMSLMA GANVVRFAPS LVIPEADIAE GLARFERAVA SIAAA
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