| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3417 |
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| Symbol | astD |
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| ID | 4254683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4050268 |
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| End bp | 4051731 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638124098 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_739455 |
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| Protein GI | 114048905 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.100597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATT TTATTAAAGG CCAGTGGCAA GCTGGCAAGG GTCATGATGT GACCTCTAGC
AACCCAGCAA ATAGCGAAAT CATTTGGCGC GGCCAAACGG CGACGGCTGA GCAAGTCAAT
GCCGCCGTCG ATGCCGCCCG TGAAGCTCAG TTCGATTGGT TTATGTTAGG TTTTGATGCG
CGTTTAAAGA TAGTCGAAGC CTATCGCTGT CAACTCGAAG CGAACAAAGC CGAATTAGCC
GAAACGATCG CTCAAGAAAC CGGTAAACCT CAATGGGAAA CGGCAACTGA AGTCGCTGCC
ATGATTGGTA AGATTGGCCT GTCGGCCACA GCTTACAACA AGCGTACCGG CACTGAGGCC
AATGACACGC CAGCAGGGCG TGCAGTACTG CGCCATAAGC CGCACGGTGT GGTTGCTGTG
TTTGGGCCTT ATAACTTTCC AGGGCATTTA CCCAATGGTC ATATAGTGCC AGCGCTGCTT
GCGGGCAATA CCGTGGTGTT TAAGCCCTCA GAATTGACCC CAAAAGTGGC CGAGTTAATG
GTTTCTCTGT GGGAAAAGGC GGGTCTGCCT GCGGGTGTTA TCAACTTAGT GCAAGGTGAA
GTCGATACGG GTAAGGCGCT GGCGTCGCAC CCACAACTCG ACGGCCTGTT CTTTACCGGT
AGCTCTCGCA CTGGTCACCT GTTGCATCAG CAATATGCGG GTCATCCGGG TAAGATCCTC
GCCTTAGAAA TGGGCGGTAA TAACCCGCTG ATTATTAAAG GCGTCGCCGA TATTAAAGCG
GCGGTGCACG ATATTCTGCA ATCGGCTTAT ATATCTTCTG GTCAGCGTTG TACCTGTGCC
CGCAGGCTCT ATGTTGAGCA AGGCGAGCAG GGCGATGCCT TAGTCGCCAA GCTGGTTGAA
GCAGTGAAGC AGATTAAAGT CGGTCCTTGG AACGCGCAGC CACAGCCATT TATGGGCTCA
ATGATTTCCG AAGCGGCAGC GAAAGGTATG GTGGCGGCGC AGGCTAACTT GCAGAACTTA
GGCGGTGTGT CGCTGGTTGA ACTCACTCAT TTGCAGGCGG GAACGGGCTT AGTCTCACCC
GGACTTATCG ATGTGACTGC GGTAAGCGAG TTACCCGATG AGGAATACTT CGGACCATTG
CTGCAATTAG TGCGCTACAG CGATTTTGAC CAAGCGATTA AGCTGGCTAA CCAAACCCGT
TATGGCTTAT CTGCGGGTAT CTTGGCCGAT AGCCGTGATG ATTATGAGTA TTTCCTAGCC
CGCATTCGTG CGGGGATTGT GAACTGGAAC AAGCAGATCA CTGGAGCCTC GGGTGCTGCG
CCCTTTGGTG GCGTAGGCGC TTCGGGTAAC CACAGGGCGA GTGCATTTTA TGCTGCCGAC
TACTGTGCTT ATCCCGTTGC CTCCGTTGAG GCGGATGCGG TGAGCTTACC CGCAAGCTTA
AGCCCTGGGT TAAGTTTAGA GTGA
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| Protein sequence | MTHFIKGQWQ AGKGHDVTSS NPANSEIIWR GQTATAEQVN AAVDAAREAQ FDWFMLGFDA
RLKIVEAYRC QLEANKAELA ETIAQETGKP QWETATEVAA MIGKIGLSAT AYNKRTGTEA
NDTPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAELM
VSLWEKAGLP AGVINLVQGE VDTGKALASH PQLDGLFFTG SSRTGHLLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVADIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALVAKLVE
AVKQIKVGPW NAQPQPFMGS MISEAAAKGM VAAQANLQNL GGVSLVELTH LQAGTGLVSP
GLIDVTAVSE LPDEEYFGPL LQLVRYSDFD QAIKLANQTR YGLSAGILAD SRDDYEYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPASL
SPGLSLE
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