Gene Shewmr7_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3412 
Symbol 
ID4254678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4046124 
End bp4046759 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID638124093 
ProductcAMP-regulatory protein 
Protein accessionYP_739450 
Protein GI114048900 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000398691 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGTAAGCC AAAACCAGAC CCAACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCACA AGTATCCCGC TAAAAGCACC TTGATCCATG CTGGTGAAGA CTCAGATACC
CTTTATTACA TCGTAAAAGG TTCTGTAGCG GTATTGATTA AAGATGAAGA AGGTAAGGAG
ATGATCCTTT CTTATCTTAA TCAAGGCGAC TTTATCGGTG AGTTAGGATT GTTCGAAGAA
CAAGCTGAAC GTACTGCTTG GGTTCGTGCG AAACAAGCAT GTGAAATTGC TGAAATCTCT
TACAAGAAGT TCAAGCAATT AATTCAAGTT AACCCCGAAA TTCTGATGAA GCTATCGGCT
CAAATGGCAT ACCGCCTACA AAGCACTAGC CAGAAAGTGG GTAATTTAGC GTTCCTCGAT
GTGGCTGGCC GTATTGCCCA GACATTGTTG CATTTAGCTA AGCAACCCGA TGCGATGACT
CACCCAGACG GCATGCAAAT TAAGATCACT CGCCAAGAAA TTGGTCAGAT CGTCGGTTGC
TCCCGCGAAA CTGTGGGTCG TATCTTAAAG ATGCTTGAAG AGCAGAATTT GATCCAAGCA
CACGGTAAAA CCATTGTGGT ATATGGTACC CGTTAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFKQLIQV NPEILMKLSA
QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R