| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3411 |
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| Symbol | |
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| ID | 4254677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4044922 |
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| End bp | 4045701 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638124092 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_739449 |
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| Protein GI | 114048899 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.001433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.530607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATACA GACAATGGGT CTTAGGCGCC GGATTCACTT TATCCCTAGG GATGAGTGCT
GCCGCGCACG CATTTTCTAT TCCACAGCCA GCCAATGAAG TTGCGGCGAG TAAATTTGTG
CACATTCAAG TGCAGGCGGA GCAGGGCGAT GCCGACGCAC AATTTTTACT GGGGCTGATG
TTTCTCTCTG GACGTTATGT ACCGCAAGAA GTGCCGACCG GATTACATTG GATGACCCTT
GCCGCCGAGC AGCAACACGA AAAGGCGCAG CAAACCTTAG CGGATCTCTC CTTTGAGGGG
CAGCTAGTGA AGCGTGACTT AGCCGTGGCC GAACGTTGGT ACAAGGATAT GGGCGAGCGT
GGTAATCGCT GGGCGCAGTT CCGTTTAGGC TTTATTTATG CCTCGGGTGG CGATGGCATT
GCGCGTAACT GTGGTAAAGC CGTGGAGCAA TTTACCCGCG TGGGGGATGA TGTTGCCCTT
GGCAATGTGG CGTGGATATT AGCGACTTGC CCCGAAGCCG AATATCGCGA TGGTAATAAA
GCGCTCGAAT TATCCTTGCA GCTGCTGAAA GTGAACGAGA ACGATCCCAC CAACCTCGAT
AACTTGGCGG CCGCCTATGC CGAAGTCGGT GATTTTGGTG CCGCGGTATC GACCCAACAA
AAAGCGATAG CTGCCTTAAA GATGACGGCT GAAGCCACTA AGACAGACGA GTTTCAGCAG
CGCCTGCACA GCTATGAGCA AAAGCGCGCC TACCGTGAGA CCTTGCGTTT ACTCGATTAA
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| Protein sequence | MKYRQWVLGA GFTLSLGMSA AAHAFSIPQP ANEVAASKFV HIQVQAEQGD ADAQFLLGLM
FLSGRYVPQE VPTGLHWMTL AAEQQHEKAQ QTLADLSFEG QLVKRDLAVA ERWYKDMGER
GNRWAQFRLG FIYASGGDGI ARNCGKAVEQ FTRVGDDVAL GNVAWILATC PEAEYRDGNK
ALELSLQLLK VNENDPTNLD NLAAAYAEVG DFGAAVSTQQ KAIAALKMTA EATKTDEFQQ
RLHSYEQKRA YRETLRLLD
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