Gene Shewmr7_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3405 
Symbol 
ID4254671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4034255 
End bp4034533 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content48% 
IMG OID638124086 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_739443 
Protein GI114048893 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA CCGCAGCCGC AGTGCATATC CTTGTTAAAC ACAAAGAGCA GGCGGAAGAT 
ATTATTAAGC AATTGAATAA AGGCGCGAAT TTTGGCGCGT TAGCCAAGCG CTATTCCTCA
TGTCCGTCGG CGAAAAAGGG CGGCGATCTC GGTGAATTCA AGCGTGGGCA GATGGTGCCT
CAGTTCGATA AAGTCGCTTT TTCCGGTGAA CTGCTGGTGC CACATCTCGT CAAAACTAAG
TTTGGTTGGC ATGTAGTGAA GGTGCTGTAT CGCACTTAA
 
Protein sequence
MYKTAAAVHI LVKHKEQAED IIKQLNKGAN FGALAKRYSS CPSAKKGGDL GEFKRGQMVP 
QFDKVAFSGE LLVPHLVKTK FGWHVVKVLY RT