Gene Shewmr7_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3398 
Symbol 
ID4255011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4027128 
End bp4027829 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content47% 
IMG OID638124079 
Producthypothetical protein 
Protein accessionYP_739436 
Protein GI114048886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000101097 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTAT CGCCGTATTT TTCTAAGCAA AATCAATCAA TTTCTGTTTC TGCACAACAA 
GCCAGTGACT TCGCCAAGAA AATTGCCCAA GACTTCAACC CTATCCACGA TGTGGGTGCT
AAGCGTTTCT GTGTGCCAGG GGACTTGCTA TTTGCCTTAG TCTTAACTCA ATACGGCTTA
AGCCAGAATA TGAAGTTTAC CTTTGCGGGT ATGGTCGGCG ATGGCGTCGA GCTGCAATTC
CCCGAACAGG TGAGCGACAG TTTTGCAATC TGCGATAACC GCGAGAAAAC CTATTTGCAG
GTGAGTCGTC AGGGCGAGGT GAGTCGCTGC GACGCGCAAA CCGAATCTTT TATTCGCAAT
TATGTGGCGT TCTCGGGTCA CAATTTTATC GACATTCTGA TGCCTTTAAT GAAACAGCAT
CAAGTGATGA TTAATCCTGA TCGTCCCTTA GTGATTTACG AGAGCATGTC ATTCGATTTG
ACCAGCCTCG ACTTTGTAGA AGTGAGTTTA TCGCTTGTAC AACAAGAGCT TAAGATTGAC
GGTAAGCGTG GCGATGTGAC GCTGCACTTT GAGCTGCACA GCGGTGAAAC CTTAGTCGGT
ACAGGAATTA AGACCTTAGT CATGAGTGGA CTGCGAGCCT ATGATGAGGT GCAAGCCCAG
CAAATGTGCG CGGCTTATGA AGGGCGTAAA ACCGAGTTTT GA
 
Protein sequence
MFLSPYFSKQ NQSISVSAQQ ASDFAKKIAQ DFNPIHDVGA KRFCVPGDLL FALVLTQYGL 
SQNMKFTFAG MVGDGVELQF PEQVSDSFAI CDNREKTYLQ VSRQGEVSRC DAQTESFIRN
YVAFSGHNFI DILMPLMKQH QVMINPDRPL VIYESMSFDL TSLDFVEVSL SLVQQELKID
GKRGDVTLHF ELHSGETLVG TGIKTLVMSG LRAYDEVQAQ QMCAAYEGRK TEF