| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3382 |
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| Symbol | |
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| ID | 4257473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4000330 |
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| End bp | 4004001 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124064 |
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| Product | hypothetical protein |
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| Protein accession | YP_739421 |
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| Protein GI | 114048871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00390467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAGCT TGATTCGTAT TGTGCTGATT GATACGCACC TTCCGGGCGT TGTGGAACTC
GCCCTCAATG GCCATACCAA TATTTGTGGT ACTAACGCCT CGGGCAAAAC CACTCTGCAA
CGCTTAGTGC CGGTATTTTA TGGCGAATAT CCTAGCCGCG TGGTGCCTTC AACCCGTGAC
AGTTTCGAGC GTTGGTACTT GCCACACGAT TCAAGCTACA TAATTTACGA ATACCAAAAG
GCCGATGGCT TACTCTATCA AGCTGTGCTG GCGTCGGCGG GCGATGGCAA AGGGGTGAAT
TACCGCTTTA TCGCTAAAGG TTTTGAGTTA AGCGATTATA TTAAATCGCA AAATGGTGAC
ACTATTCTTT GCCACACCAT GGCGGAACTG GGCCGCGATT TAAAACGCCA AGGTATTGCC
ACCACTAACT TGCTTAACAC CCGCGAATAC CGCGCGATTA TTCAAAACGA TCGCACTTTG
TTAAGTACGG GCAGTAACCG CAGCGAACTG CGAGCCTATG CGCACCAATT CGCCCTGTGT
GAAGGTGAGC ATTCACTGCG CCACATCGAA AAACTCGCCA AGGCGGTGCA CTCCAAAGAA
GGCAAAATGG AAACGGTCAA ATCCATGATT GCCGCCATTT TGGAAGAAGA CGGGGTGAAT
CCACCTAGCT CACGCCTCAA TCCACAACGC GTCGAGGCGT GGATCCGCGA GAGTCAATTA
ATCCAAGGCT TTGAAGTGAT CCGCCCCGAG TTTGAAAAGC TCGAGCAGGA GTTTAACCAA
TTACTCAGCG CCGAGATGCG TCTCTCGAGC CTGTCCCGTG GCTATCGCAA CGACGAAAGC
CTAGAGGCCG ATCGTTTAGA GATCCAACAA ACCCTGTCTA AGGAGCTGAA TTTAAAGCTT
CGAATGTTGG ACGACGAATG GAAAGAAGTG CGTGACGAGC TTAACCTCGA CCTATCCGCC
GCCAAGGGCG ACGTGGCCAA GTGCGAGTAC GAACTCGATG CGATTGAAGA TCAGCACGGC
GCCTTTTTAG ATGCCAATAT CGAGCAAGCC AAGGCCGACC TGGACATGCT GCCAAACTGG
CGCGCTGACA TGGAAAACTT AAGCGAGCGC CATAAATTAC AAACCGAAAA ACACCAAGAT
ATTGAAGCGG CTTACAATGC CCGCCGCAGC AAAATTGGCG AGCAGTTAAA CCGCGAGCTT
GAAGGCTTAC ACGCGGATCA GGACAAGCAA CGCGGAGCGC GCGATAAGCA GCGTGAAGTG
GCTAGAGCCG ATCTCGATGC CCTCGAAGCC CAATGGCGTA GCCAAATGGA TGCGGGCAAG
GCGAGCTTTA GCGAGCAGGA ATATCAATTC AAACTCAATG CCGCCGAGCT TAAATTACGT
GTCGATGGCG TGACCTACAC CGAGGAAGAA AAGTTAAGTC TCGCGATTTT CGACGAGCGG
ATTCACCGCG CCGACGAAGA GCAAGAAAGC TGTAACGCTA AGGTGGAGCG GTTAACGGGT
GAGGAGCGCA AATTGCGCGC CAAACGCGAC CAAGCCAACG AAGCGTTACG AATCGCCAGC
CTGCGCGTTA ACGAGCGCCA AACGGCGCTC GATGAACTGC ACCATATGCT GTTCCCCCAA
TCCCATACCT TGCTCGAGTT CCTGCGTAAG GAAGCCCAAG GTTGGGAGCA GAGTCTGGGT
AAAGTCATTG CCCCCGAATT ACTGCACCGC ACCGATTTAC ATCCGAGCGT GACAGGAACG
AGCGACACCC TGTTTGGGGT ACATTTGGAT CTTAAAGCCA TTGATGTGCC TGAATATGCC
GCCTCGGAGC AGGAGCTGCG TATTCGTTTA AGCAAGGCCG AAGAGGCCCT GCAAAGCGCG
CAGGAGTTAC AGGTCGAGGC CGAATCACAG CTGGTGGCGA TTAACGGTGA GCTGGATAAA
CTCAGCCGTG AACTCACCTT CGCCCGCACG GCTTACAAAA ATAGCCGCGA TGATTTACGT
CGTCTGTTCG ATGAAAAACG CAGTGAGCAA GACAAGATCA ATAAGGCGCT GGCCGAGCGT
AAAGCCTTTG CCCAGCAGCG CTTAACTCAA CTCGATGGCG AGCTAAAGCA GCTTAAGCAT
CAACATCAGC TCTGGCTCGA AGAGCAAAAA GAGCAGGCGC TCGAAGCGCG GATGGAAAAA
CAAGCCTACT GGCAGGAAGT TATCGGCGCG CTCGACAATC AACTTGGGCA AATTAAGGCG
ACTATAGACG CCCGCCGCGA AAGCGCTAAG GCCGAGCAGA AAGCCTGTGA AACCTGGTAC
AAAAACGAGC TTAAATCCCG CGGTGTGGAT GAGGACAATA TCCTTAAACT CAAGCAACAA
ATCCGCGAGC TTGAAACCAA AATCAGTCGC GCCGAGCAGC GTCGCAGCGA AGTATTGCGC
TTCGACGATT GGTATCAACA CACTTGGTTG CTGCGTAAGC CTAAGTTGCA GACCCAATTG
AGCGATGTGA AACGTGCCGC CTCGGAAATC GATCAGCAGC TTAAAGCCAA GACCCAAGAA
GTGAAGACCC GCCGTCAACA ACTCGAGACC GAGCGTAAGG CCTCGGATGC GGCGCAGATT
GAAGCCTCTG AAAACTTAAC CAAACTGCGC GCCGTGATGC GTAAGTTGGC CGAGCTGAAA
CTGCCCGCCA ACAATGAAGA AGCTCAGGGT AGCCTAGGTG AGCGTTTGCG TCAGGGTGAA
GATTTACTGT TAAAACGCGA TTATTTGATG GGCTCGGTTA AGCAATATGT GGAGCATTTC
GACTCTGTAA TTGCCAGCAA GTCAGGCTCA GGTTTAGCCG AGACTTGGGA GCGCGCCCGC
GAAGAGTCGA GCTTTATCAA TGACAAAGGT ATTCGCCTGC TGGATTACCG CAAACTAGTG
CCACAGCTAG AACAGCTACT CAATGTGATT GTGCCGCAAT CGATTATGGC GCTGCGTGAA
CAGGGGCGGA TCTTCGGGGT CGACTTAACT GCCTTCTACG ATGTACTTGC CGATATCGAC
CGTCGCATCG CCTCCCAGAG TGCGCGCATT ACCCGCGAAG TGGGCGAGGA GTTATTCCTC
GATGGCGTGT CCGAGTCTGC GGTCCGTATT CGTTCTAAGA TCAGCGAATT AGAGTTTTGG
CCTGAGCTTG AGCAGTTCGT TAAAGCCTTC AAAAATTGGA AGGCCGATGG CTTTAATGGT
CTGCCCGATG AGGAATACAC CAATAGCATG CGCCGCGCCT TGGATATTAT TGGCCGCGCG
GCCTTAACTG GCGGCATTTC TAAGTTGCTG GAAATCGAGC TGCGACTCAA AGAGGGCAAT
AGCGACCTGA TTATCCGCAC CGACAGACAG CTGAACGAAT CCTCGAGCCA CGGTATGGCT
TACCTGATTT TATGTAAGTT CTTACTCGCC TTTACCCGTT TGTTACGTGG CCGTGCCGAT
GTGACCATTC ACTGGCCGAT CGACGAGCTG GGCACGCTGC ACCACACCAA CGTGAAGAAG
ATTTTCGATG CCTGTGGTAA CAACAATATC AGCGTGTTAG GCGCCTTCCC GAACCCAGAG
TCAGAAGTGT TGAACCTGTT CGAGAACCGT TACATTATCA ATAAACAAAC CAAGAAGTTG
CAGGTGGTGA AGCCCAAAGC CAATCCGATT GCCGATATGT TGAGTAAACG CCTGAGCAAG
GAGGCCATCT AA
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| Protein sequence | MPSLIRIVLI DTHLPGVVEL ALNGHTNICG TNASGKTTLQ RLVPVFYGEY PSRVVPSTRD
SFERWYLPHD SSYIIYEYQK ADGLLYQAVL ASAGDGKGVN YRFIAKGFEL SDYIKSQNGD
TILCHTMAEL GRDLKRQGIA TTNLLNTREY RAIIQNDRTL LSTGSNRSEL RAYAHQFALC
EGEHSLRHIE KLAKAVHSKE GKMETVKSMI AAILEEDGVN PPSSRLNPQR VEAWIRESQL
IQGFEVIRPE FEKLEQEFNQ LLSAEMRLSS LSRGYRNDES LEADRLEIQQ TLSKELNLKL
RMLDDEWKEV RDELNLDLSA AKGDVAKCEY ELDAIEDQHG AFLDANIEQA KADLDMLPNW
RADMENLSER HKLQTEKHQD IEAAYNARRS KIGEQLNREL EGLHADQDKQ RGARDKQREV
ARADLDALEA QWRSQMDAGK ASFSEQEYQF KLNAAELKLR VDGVTYTEEE KLSLAIFDER
IHRADEEQES CNAKVERLTG EERKLRAKRD QANEALRIAS LRVNERQTAL DELHHMLFPQ
SHTLLEFLRK EAQGWEQSLG KVIAPELLHR TDLHPSVTGT SDTLFGVHLD LKAIDVPEYA
ASEQELRIRL SKAEEALQSA QELQVEAESQ LVAINGELDK LSRELTFART AYKNSRDDLR
RLFDEKRSEQ DKINKALAER KAFAQQRLTQ LDGELKQLKH QHQLWLEEQK EQALEARMEK
QAYWQEVIGA LDNQLGQIKA TIDARRESAK AEQKACETWY KNELKSRGVD EDNILKLKQQ
IRELETKISR AEQRRSEVLR FDDWYQHTWL LRKPKLQTQL SDVKRAASEI DQQLKAKTQE
VKTRRQQLET ERKASDAAQI EASENLTKLR AVMRKLAELK LPANNEEAQG SLGERLRQGE
DLLLKRDYLM GSVKQYVEHF DSVIASKSGS GLAETWERAR EESSFINDKG IRLLDYRKLV
PQLEQLLNVI VPQSIMALRE QGRIFGVDLT AFYDVLADID RRIASQSARI TREVGEELFL
DGVSESAVRI RSKISELEFW PELEQFVKAF KNWKADGFNG LPDEEYTNSM RRALDIIGRA
ALTGGISKLL EIELRLKEGN SDLIIRTDRQ LNESSSHGMA YLILCKFLLA FTRLLRGRAD
VTIHWPIDEL GTLHHTNVKK IFDACGNNNI SVLGAFPNPE SEVLNLFENR YIINKQTKKL
QVVKPKANPI ADMLSKRLSK EAI
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